Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.75■□□□□ 0.91
AP1S1P61966 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP1S1P61966 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP1S1P61966 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
AP1S1P61966 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
AP1S1P61966 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AP1S1P61966 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP1S1P61966 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP1S1P61966 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AP1S1P61966 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AP1S1P61966 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
AP1S1P61966 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.74■□□□□ 0.91
AP1S1P61966 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
AP1S1P61966 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.74■□□□□ 0.91
AP1S1P61966 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP1S1P61966 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.74■□□□□ 0.91
AP1S1P61966 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
AP1S1P61966 AC104771.1-201ENST00000603335 964 ntBASIC20.74■□□□□ 0.91
AP1S1P61966 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.74■□□□□ 0.91
AP1S1P61966 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.74■□□□□ 0.91
AP1S1P61966 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP1S1P61966 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP1S1P61966 AC027702.1-201ENST00000563810 1770 ntBASIC20.74■□□□□ 0.91
AP1S1P61966 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP1S1P61966 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
AP1S1P61966 PLK5-205ENST00000642079 1969 ntBASIC20.74■□□□□ 0.91
AP1S1P61966 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AP1S1P61966 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP1S1P61966 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.73■□□□□ 0.91
AP1S1P61966 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP1S1P61966 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP1S1P61966 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
AP1S1P61966 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.73■□□□□ 0.91
AP1S1P61966 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
AP1S1P61966 HLA-L-209ENST00000420110 1011 ntBASIC20.73■□□□□ 0.91
AP1S1P61966 PGM5P4-201ENST00000421970 445 ntBASIC20.73■□□□□ 0.91
AP1S1P61966 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
AP1S1P61966 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.73■□□□□ 0.91
AP1S1P61966 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.73■□□□□ 0.91
AP1S1P61966 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.73■□□□□ 0.91
AP1S1P61966 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.73■□□□□ 0.91
AP1S1P61966 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.73■□□□□ 0.91
AP1S1P61966 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.73■□□□□ 0.91
AP1S1P61966 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP1S1P61966 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP1S1P61966 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP1S1P61966 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP1S1P61966 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP1S1P61966 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.73■□□□□ 0.91
AP1S1P61966 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.72■□□□□ 0.91
AP1S1P61966 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
AP1S1P61966 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.72■□□□□ 0.91
AP1S1P61966 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP1S1P61966 AC087633.2-202ENST00000565166 1439 ntBASIC20.72■□□□□ 0.91
AP1S1P61966 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP1S1P61966 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP1S1P61966 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP1S1P61966 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
AP1S1P61966 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.72■□□□□ 0.91
AP1S1P61966 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.72■□□□□ 0.91
AP1S1P61966 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.72■□□□□ 0.91
AP1S1P61966 CYP2T3P-201ENST00000601990 817 ntBASIC20.72■□□□□ 0.91
AP1S1P61966 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP1S1P61966 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
AP1S1P61966 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
AP1S1P61966 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP1S1P61966 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP1S1P61966 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.72■□□□□ 0.91
AP1S1P61966 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.71■□□□□ 0.91
AP1S1P61966 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP1S1P61966 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP1S1P61966 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.71■□□□□ 0.91
AP1S1P61966 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP1S1P61966 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP1S1P61966 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.71■□□□□ 0.91
AP1S1P61966 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP1S1P61966 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP1S1P61966 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
AP1S1P61966 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
AP1S1P61966 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP1S1P61966 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP1S1P61966 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.71■□□□□ 0.91
AP1S1P61966 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
AP1S1P61966 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
AP1S1P61966 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
AP1S1P61966 AC006128.1-201ENST00000624704 1661 ntBASIC20.7■□□□□ 0.91
AP1S1P61966 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP1S1P61966 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.7■□□□□ 0.9
AP1S1P61966 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP1S1P61966 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP1S1P61966 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP1S1P61966 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.7■□□□□ 0.9
AP1S1P61966 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP1S1P61966 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.7■□□□□ 0.9
AP1S1P61966 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.7■□□□□ 0.9
AP1S1P61966 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
AP1S1P61966 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP1S1P61966 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.7■□□□□ 0.9
AP1S1P61966 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.7■□□□□ 0.9
AP1S1P61966 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms