Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CXCR4P61073 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
CXCR4P61073 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.72■□□□□ 0.59
CXCR4P61073 AC136469.2-201ENST00000623944 1028 ntBASIC18.72■□□□□ 0.59
CXCR4P61073 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CXCR4P61073 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CXCR4P61073 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CXCR4P61073 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CXCR4P61073 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CXCR4P61073 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
CXCR4P61073 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CXCR4P61073 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CXCR4P61073 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CXCR4P61073 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.71■□□□□ 0.59
CXCR4P61073 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CXCR4P61073 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CXCR4P61073 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CXCR4P61073 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CXCR4P61073 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CXCR4P61073 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CXCR4P61073 AC125437.2-201ENST00000625180 2167 ntBASIC18.71■□□□□ 0.59
CXCR4P61073 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.71■□□□□ 0.59
CXCR4P61073 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CXCR4P61073 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CXCR4P61073 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CXCR4P61073 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CXCR4P61073 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CXCR4P61073 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CXCR4P61073 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CXCR4P61073 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.71■□□□□ 0.59
CXCR4P61073 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.71■□□□□ 0.59
CXCR4P61073 AC011298.3-201ENST00000615796 283 ntBASIC18.71■□□□□ 0.59
CXCR4P61073 AP000974.1-201ENST00000623909 2387 ntBASIC18.71■□□□□ 0.59
CXCR4P61073 AC011484.1-201ENST00000377652 1995 ntBASIC18.71■□□□□ 0.59
CXCR4P61073 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CXCR4P61073 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CXCR4P61073 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CXCR4P61073 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CXCR4P61073 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CXCR4P61073 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CXCR4P61073 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CXCR4P61073 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXCR4P61073 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CXCR4P61073 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CXCR4P61073 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXCR4P61073 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXCR4P61073 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.7■□□□□ 0.58
CXCR4P61073 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXCR4P61073 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CXCR4P61073 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CXCR4P61073 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.7■□□□□ 0.58
CXCR4P61073 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.7■□□□□ 0.58
CXCR4P61073 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
CXCR4P61073 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CXCR4P61073 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.7■□□□□ 0.58
CXCR4P61073 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXCR4P61073 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CXCR4P61073 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.7■□□□□ 0.58
CXCR4P61073 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CXCR4P61073 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CXCR4P61073 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXCR4P61073 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CXCR4P61073 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXCR4P61073 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXCR4P61073 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CXCR4P61073 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
CXCR4P61073 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CXCR4P61073 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.69■□□□□ 0.58
CXCR4P61073 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
CXCR4P61073 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.69■□□□□ 0.58
CXCR4P61073 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.69■□□□□ 0.58
CXCR4P61073 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.69■□□□□ 0.58
CXCR4P61073 MIR4466-201ENST00000606121 54 ntBASIC18.69■□□□□ 0.58
CXCR4P61073 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXCR4P61073 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXCR4P61073 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CXCR4P61073 AC092720.2-201ENST00000602388 1665 ntBASIC18.69■□□□□ 0.58
CXCR4P61073 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CXCR4P61073 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CXCR4P61073 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CXCR4P61073 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CXCR4P61073 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CXCR4P61073 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CXCR4P61073 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CXCR4P61073 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CXCR4P61073 AL356441.2-201ENST00000443009 864 ntBASIC18.68■□□□□ 0.58
CXCR4P61073 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CXCR4P61073 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXCR4P61073 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.68■□□□□ 0.58
CXCR4P61073 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CXCR4P61073 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXCR4P61073 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXCR4P61073 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXCR4P61073 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CXCR4P61073 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.68■□□□□ 0.58
CXCR4P61073 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.68■□□□□ 0.58
CXCR4P61073 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CXCR4P61073 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CXCR4P61073 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXCR4P61073 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms