Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN18P56856 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CLDN18P56856 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN18P56856 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN18P56856 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN18P56856 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CLDN18P56856 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN18P56856 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN18P56856 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.43■□□□□ 0.54
CLDN18P56856 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN18P56856 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN18P56856 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN18P56856 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN18P56856 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN18P56856 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CLDN18P56856 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.43■□□□□ 0.54
CLDN18P56856 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.43■□□□□ 0.54
CLDN18P56856 AC097658.1-201ENST00000475555 843 ntBASIC18.43■□□□□ 0.54
CLDN18P56856 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CLDN18P56856 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CLDN18P56856 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN18P56856 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN18P56856 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN18P56856 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CLDN18P56856 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CLDN18P56856 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN18P56856 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.43■□□□□ 0.54
CLDN18P56856 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.43■□□□□ 0.54
CLDN18P56856 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN18P56856 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN18P56856 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN18P56856 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN18P56856 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.42■□□□□ 0.54
CLDN18P56856 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN18P56856 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN18P56856 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN18P56856 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN18P56856 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN18P56856 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.42■□□□□ 0.54
CLDN18P56856 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.42■□□□□ 0.54
CLDN18P56856 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN18P56856 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN18P56856 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN18P56856 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN18P56856 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN18P56856 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN18P56856 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN18P56856 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN18P56856 AC087633.2-202ENST00000565166 1439 ntBASIC18.41■□□□□ 0.54
CLDN18P56856 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN18P56856 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN18P56856 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CLDN18P56856 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN18P56856 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.41■□□□□ 0.54
CLDN18P56856 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.41■□□□□ 0.54
CLDN18P56856 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.41■□□□□ 0.54
CLDN18P56856 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN18P56856 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN18P56856 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CLDN18P56856 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.41■□□□□ 0.54
CLDN18P56856 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN18P56856 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CLDN18P56856 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN18P56856 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN18P56856 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN18P56856 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN18P56856 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.4■□□□□ 0.54
CLDN18P56856 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.4■□□□□ 0.54
CLDN18P56856 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.4■□□□□ 0.54
CLDN18P56856 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDN18P56856 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN18P56856 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CLDN18P56856 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN18P56856 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CLDN18P56856 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLDN18P56856 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.39■□□□□ 0.54
CLDN18P56856 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN18P56856 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN18P56856 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN18P56856 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN18P56856 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.39■□□□□ 0.53
CLDN18P56856 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN18P56856 AC105020.6-201ENST00000621523 1217 ntBASIC18.39■□□□□ 0.53
CLDN18P56856 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN18P56856 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CLDN18P56856 AC026310.3-201ENST00000625186 2373 ntBASIC18.39■□□□□ 0.53
CLDN18P56856 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN18P56856 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN18P56856 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN18P56856 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CLDN18P56856 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN18P56856 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN18P56856 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.38■□□□□ 0.53
CLDN18P56856 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN18P56856 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.38■□□□□ 0.53
CLDN18P56856 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.38■□□□□ 0.53
CLDN18P56856 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.38■□□□□ 0.53
CLDN18P56856 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN18P56856 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CLDN18P56856 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms