Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 DUX4L16-201ENST00000555130 1264 ntBASIC20.8■□□□□ 0.92
WNT3AP56704 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.8■□□□□ 0.92
WNT3AP56704 BID-214ENST00000617586 542 ntTSL 5 BASIC20.8■□□□□ 0.92
WNT3AP56704 AC013268.1-206ENST00000638368 961 ntBASIC20.8■□□□□ 0.92
WNT3AP56704 AC112229.1-201ENST00000639295 961 ntBASIC20.8■□□□□ 0.92
WNT3AP56704 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.8■□□□□ 0.92
WNT3AP56704 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
WNT3AP56704 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
WNT3AP56704 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
WNT3AP56704 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
WNT3AP56704 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
WNT3AP56704 FP700111.2-201ENST00000619190 1892 ntBASIC20.79■□□□□ 0.92
WNT3AP56704 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
WNT3AP56704 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
WNT3AP56704 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
WNT3AP56704 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
WNT3AP56704 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
WNT3AP56704 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
WNT3AP56704 AL157384.1-201ENST00000445995 2473 ntBASIC20.79■□□□□ 0.92
WNT3AP56704 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.79■□□□□ 0.92
WNT3AP56704 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
WNT3AP56704 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
WNT3AP56704 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
WNT3AP56704 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
WNT3AP56704 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.79■□□□□ 0.92
WNT3AP56704 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
WNT3AP56704 AC092437.1-201ENST00000624794 1048 ntBASIC20.79■□□□□ 0.92
WNT3AP56704 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
WNT3AP56704 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
WNT3AP56704 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
WNT3AP56704 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
WNT3AP56704 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
WNT3AP56704 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
WNT3AP56704 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
WNT3AP56704 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.78■□□□□ 0.92
WNT3AP56704 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
WNT3AP56704 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
WNT3AP56704 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
WNT3AP56704 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
WNT3AP56704 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.78■□□□□ 0.92
WNT3AP56704 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
WNT3AP56704 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
WNT3AP56704 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
WNT3AP56704 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.78■□□□□ 0.92
WNT3AP56704 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.78■□□□□ 0.92
WNT3AP56704 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
WNT3AP56704 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
WNT3AP56704 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
WNT3AP56704 CDV3P1-201ENST00000471403 739 ntBASIC20.78■□□□□ 0.92
WNT3AP56704 AL591742.1-201ENST00000604433 565 ntBASIC20.78■□□□□ 0.92
WNT3AP56704 IKBKGP1-201ENST00000612193 1073 ntBASIC20.78■□□□□ 0.92
WNT3AP56704 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
WNT3AP56704 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
WNT3AP56704 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
WNT3AP56704 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
WNT3AP56704 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
WNT3AP56704 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
WNT3AP56704 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.77■□□□□ 0.92
WNT3AP56704 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.77■□□□□ 0.92
WNT3AP56704 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.77■□□□□ 0.92
WNT3AP56704 CNN2P6-201ENST00000439038 900 ntBASIC20.77■□□□□ 0.92
WNT3AP56704 AC007322.4-201ENST00000509611 723 ntBASIC20.77■□□□□ 0.92
WNT3AP56704 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
WNT3AP56704 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
WNT3AP56704 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
WNT3AP56704 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
WNT3AP56704 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
WNT3AP56704 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
WNT3AP56704 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.77■□□□□ 0.92
WNT3AP56704 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
WNT3AP56704 FEM1AP1-201ENST00000431297 1995 ntBASIC20.77■□□□□ 0.92
WNT3AP56704 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.77■□□□□ 0.92
WNT3AP56704 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
WNT3AP56704 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
WNT3AP56704 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
WNT3AP56704 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
WNT3AP56704 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.76■□□□□ 0.91
WNT3AP56704 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
WNT3AP56704 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
WNT3AP56704 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
WNT3AP56704 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.76■□□□□ 0.91
WNT3AP56704 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.76■□□□□ 0.91
WNT3AP56704 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.76■□□□□ 0.91
WNT3AP56704 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.76■□□□□ 0.91
WNT3AP56704 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.76■□□□□ 0.91
WNT3AP56704 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
WNT3AP56704 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
WNT3AP56704 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
WNT3AP56704 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
WNT3AP56704 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
WNT3AP56704 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
WNT3AP56704 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
WNT3AP56704 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
WNT3AP56704 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
WNT3AP56704 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
WNT3AP56704 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.75■□□□□ 0.91
WNT3AP56704 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
WNT3AP56704 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
WNT3AP56704 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
WNT3AP56704 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms