Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.37■□□□□ 0.85
CLNS1AP54105 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.37■□□□□ 0.85
CLNS1AP54105 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.37■□□□□ 0.85
CLNS1AP54105 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.37■□□□□ 0.85
CLNS1AP54105 DUX4L19-201ENST00000557448 1267 ntBASIC20.37■□□□□ 0.85
CLNS1AP54105 AC010525.1-201ENST00000585559 441 ntBASIC20.37■□□□□ 0.85
CLNS1AP54105 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLNS1AP54105 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLNS1AP54105 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLNS1AP54105 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLNS1AP54105 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLNS1AP54105 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLNS1AP54105 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLNS1AP54105 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CLNS1AP54105 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLNS1AP54105 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
CLNS1AP54105 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLNS1AP54105 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLNS1AP54105 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.36■□□□□ 0.85
CLNS1AP54105 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.36■□□□□ 0.85
CLNS1AP54105 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.36■□□□□ 0.85
CLNS1AP54105 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLNS1AP54105 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CLNS1AP54105 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLNS1AP54105 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CLNS1AP54105 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLNS1AP54105 AC005082.1-201ENST00000413042 2259 ntBASIC20.36■□□□□ 0.85
CLNS1AP54105 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLNS1AP54105 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLNS1AP54105 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.35■□□□□ 0.85
CLNS1AP54105 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLNS1AP54105 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLNS1AP54105 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CLNS1AP54105 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLNS1AP54105 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.35■□□□□ 0.85
CLNS1AP54105 AL158211.5-201ENST00000623583 2518 ntBASIC20.35■□□□□ 0.85
CLNS1AP54105 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.35■□□□□ 0.85
CLNS1AP54105 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CLNS1AP54105 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLNS1AP54105 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CLNS1AP54105 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLNS1AP54105 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.35■□□□□ 0.85
CLNS1AP54105 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLNS1AP54105 SYT6-210ENST00000641643 1587 ntBASIC20.34■□□□□ 0.85
CLNS1AP54105 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CLNS1AP54105 AC004408.2-201ENST00000623613 2777 ntBASIC20.34■□□□□ 0.85
CLNS1AP54105 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLNS1AP54105 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLNS1AP54105 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.34■□□□□ 0.85
CLNS1AP54105 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.34■□□□□ 0.85
CLNS1AP54105 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CLNS1AP54105 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLNS1AP54105 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLNS1AP54105 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLNS1AP54105 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.34■□□□□ 0.85
CLNS1AP54105 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.34■□□□□ 0.85
CLNS1AP54105 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CLNS1AP54105 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
CLNS1AP54105 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.34■□□□□ 0.85
CLNS1AP54105 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.34■□□□□ 0.85
CLNS1AP54105 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLNS1AP54105 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CLNS1AP54105 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLNS1AP54105 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLNS1AP54105 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLNS1AP54105 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.33■□□□□ 0.85
CLNS1AP54105 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLNS1AP54105 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.33■□□□□ 0.85
CLNS1AP54105 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLNS1AP54105 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CLNS1AP54105 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CLNS1AP54105 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.33■□□□□ 0.85
CLNS1AP54105 AP005435.1-201ENST00000529293 1178 ntBASIC20.33■□□□□ 0.85
CLNS1AP54105 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CLNS1AP54105 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.33■□□□□ 0.84
CLNS1AP54105 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLNS1AP54105 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.33■□□□□ 0.84
CLNS1AP54105 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLNS1AP54105 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLNS1AP54105 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLNS1AP54105 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CLNS1AP54105 GABARAPL3-202ENST00000624044 1851 ntBASIC20.33■□□□□ 0.84
CLNS1AP54105 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CLNS1AP54105 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLNS1AP54105 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.32■□□□□ 0.84
CLNS1AP54105 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLNS1AP54105 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.32■□□□□ 0.84
CLNS1AP54105 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLNS1AP54105 SERBP1P1-201ENST00000396021 1160 ntBASIC20.32■□□□□ 0.84
CLNS1AP54105 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.32■□□□□ 0.84
CLNS1AP54105 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.32■□□□□ 0.84
CLNS1AP54105 AC136469.2-201ENST00000623944 1028 ntBASIC20.32■□□□□ 0.84
CLNS1AP54105 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CLNS1AP54105 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLNS1AP54105 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CLNS1AP54105 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLNS1AP54105 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.32■□□□□ 0.84
CLNS1AP54105 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLNS1AP54105 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLNS1AP54105 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms