Protein–RNA interactions for Protein: P53829

CAF40, Protein CAF40, yeastyeast

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF40P53829 RPI1YIL119C 1224 nt2.47□□□□□ -2.01
CAF40P53829 BET3YKR068C 582 nt2.47□□□□□ -2.01
CAF40P53829 SWM2YNR004W 441 nt2.47□□□□□ -2.01
CAF40P53829 RRD2YPL152W 1077 nt2.47□□□□□ -2.01
CAF40P53829 VAC8YEL013W 1737 nt2.47□□□□□ -2.01
CAF40P53829 SNF12YNR023W 1701 nt2.47□□□□□ -2.01
CAF40P53829 YOL057WYOL057W 2136 nt2.47□□□□□ -2.01
CAF40P53829 SOK1YDR006C 2706 nt2.47□□□□□ -2.01
CAF40P53829 snR56snR56 88 nt2.46□□□□□ -2.02
CAF40P53829 YDL032WYDL032W 312 nt2.46□□□□□ -2.02
CAF40P53829 YDR118W-AYDR118W-A 117 nt2.46□□□□□ -2.02
CAF40P53829 ERG28YER044C 447 nt2.46□□□□□ -2.02
CAF40P53829 YAL037WYAL037W 804 nt2.46□□□□□ -2.02
CAF40P53829 ARV1YLR242C 966 nt2.46□□□□□ -2.02
CAF40P53829 IMP4YNL075W 873 nt2.46□□□□□ -2.02
CAF40P53829 KTI11YBL071W-A 249 nt2.46□□□□□ -2.02
CAF40P53829 ARR2YPR200C 393 nt2.46□□□□□ -2.02
CAF40P53829 YDR239CYDR239C 2364 nt2.46□□□□□ -2.02
CAF40P53829 SPE1YKL184W 1401 nt2.45□□□□□ -2.02
CAF40P53829 STE6YKL209C 3873 nt2.45□□□□□ -2.02
CAF40P53829 GET1YGL020C 708 nt2.45□□□□□ -2.02
CAF40P53829 RPL14BYHL001W 417 nt2.45□□□□□ -2.02
CAF40P53829 COX23YHR116W 456 nt2.45□□□□□ -2.02
CAF40P53829 YMR052C-AYMR052C-A 366 nt2.45□□□□□ -2.02
CAF40P53829 PKR1YMR123W 369 nt2.45□□□□□ -2.02
CAF40P53829 YIL169CYIL169C 2988 nt2.45□□□□□ -2.02
CAF40P53829 AI2Q0055 2565 nt2.45□□□□□ -2.02
CAF40P53829 MES1YGR264C 2256 nt2.44□□□□□ -2.02
CAF40P53829 YIL082W-AYIL082W-A 4497 nt2.44□□□□□ -2.02
CAF40P53829 HEH2YDR458C 1992 nt2.44□□□□□ -2.02
CAF40P53829 MRH1YDR033W 963 nt2.44□□□□□ -2.02
CAF40P53829 YDR114CYDR114C 303 nt2.44□□□□□ -2.02
CAF40P53829 Q0142Q0142 177 nt2.44□□□□□ -2.02
CAF40P53829 RNR4YGR180C 1038 nt2.44□□□□□ -2.02
CAF40P53829 FYV4YHR059W 393 nt2.44□□□□□ -2.02
CAF40P53829 YML108WYML108W 318 nt2.44□□□□□ -2.02
CAF40P53829 IGO1YNL157W 507 nt2.44□□□□□ -2.02
CAF40P53829 NMA111YNL123W 2994 nt2.44□□□□□ -2.02
CAF40P53829 RTR2YDR066C 591 nt2.43□□□□□ -2.02
CAF40P53829 TIM11YDR322C-A 291 nt2.43□□□□□ -2.02
CAF40P53829 HPA3YEL066W 540 nt2.43□□□□□ -2.02
CAF40P53829 ERV1YGR029W 570 nt2.43□□□□□ -2.02
CAF40P53829 BIG1YHR101C 1008 nt2.43□□□□□ -2.02
CAF40P53829 SEN15YMR059W 387 nt2.43□□□□□ -2.02
CAF40P53829 HSP10YOR020C 321 nt2.43□□□□□ -2.02
CAF40P53829 MSS18YPR134W 807 nt2.43□□□□□ -2.02
CAF40P53829 MLH1YMR167W 2310 nt2.43□□□□□ -2.02
CAF40P53829 GYP7YDL234C 2241 nt2.42□□□□□ -2.02
CAF40P53829 YCR081C-AYCR081C-A 237 nt2.42□□□□□ -2.02
CAF40P53829 APC11YDL008W 498 nt2.42□□□□□ -2.02
CAF40P53829 RAD6YGL058W 519 nt2.42□□□□□ -2.02
CAF40P53829 HUR1YGL168W 333 nt2.42□□□□□ -2.02
CAF40P53829 YLR154W-FYLR154W-F 141 nt2.42□□□□□ -2.02
CAF40P53829 SAS2YMR127C 1017 nt2.42□□□□□ -2.02
CAF40P53829 YBR076C-AYBR076C-A 267 nt2.42□□□□□ -2.02
CAF40P53829 AXL1YPR122W 3627 nt2.42□□□□□ -2.02
CAF40P53829 SIN3YOL004W 4611 nt2.41□□□□□ -2.02
CAF40P53829 AGA2YGL032C 264 nt2.41□□□□□ -2.02
CAF40P53829 YPS5YGL259W 498 nt2.41□□□□□ -2.02
CAF40P53829 VPH2YKL119C 648 nt2.41□□□□□ -2.02
CAF40P53829 YKR033CYKR033C 426 nt2.41□□□□□ -2.02
CAF40P53829 YLR406C-AYLR406C-A 150 nt2.41□□□□□ -2.02
CAF40P53829 TIF11YMR260C 462 nt2.41□□□□□ -2.02
CAF40P53829 CMC2YBL059C-A 330 nt2.41□□□□□ -2.02
CAF40P53829 NOP15YNL110C 663 nt2.41□□□□□ -2.02
CAF40P53829 MET6YER091C 2304 nt2.41□□□□□ -2.02
CAF40P53829 MRD1YPR112C 2664 nt2.41□□□□□ -2.02
CAF40P53829 GEA1YJR031C 4227 nt2.41□□□□□ -2.02
CAF40P53829 CWC22YGR278W 1734 nt2.4□□□□□ -2.02
CAF40P53829 TIF35YDR429C 825 nt2.4□□□□□ -2.03
CAF40P53829 RPL29YFR032C-A 180 nt2.4□□□□□ -2.03
CAF40P53829 ECL1YGR146C 636 nt2.4□□□□□ -2.03
CAF40P53829 SPC1YJR010C-A 285 nt2.4□□□□□ -2.03
CAF40P53829 RPL8BYLL045C 771 nt2.4□□□□□ -2.03
CAF40P53829 YMR153C-AYMR153C-A 336 nt2.4□□□□□ -2.03
CAF40P53829 PEP12YOR036W 867 nt2.4□□□□□ -2.03
CAF40P53829 FYV12YOR183W 390 nt2.4□□□□□ -2.03
CAF40P53829 LEE1YPL054W 906 nt2.4□□□□□ -2.03
CAF40P53829 RSA1YPL193W 1146 nt2.4□□□□□ -2.03
CAF40P53829 POL3YDL102W 3294 nt2.4□□□□□ -2.03
CAF40P53829 RGC1YPR115W 3252 nt2.4□□□□□ -2.03
CAF40P53829 GCD10YNL062C 1437 nt2.4□□□□□ -2.03
CAF40P53829 UTP14YML093W 2700 nt2.4□□□□□ -2.03
CAF40P53829 PAM1YDR251W 2493 nt2.4□□□□□ -2.03
CAF40P53829 UTP13YLR222C 2454 nt2.4□□□□□ -2.03
CAF40P53829 YDR157WYDR157W 402 nt2.39□□□□□ -2.03
CAF40P53829 YMR31YFR049W 372 nt2.39□□□□□ -2.03
CAF40P53829 RTS3YGR161C 792 nt2.39□□□□□ -2.03
CAF40P53829 YHL006W-AYHL006W-A 354 nt2.39□□□□□ -2.03
CAF40P53829 YIL030W-AYIL030W-A 339 nt2.39□□□□□ -2.03
CAF40P53829 YLR101CYLR101C 396 nt2.39□□□□□ -2.03
CAF40P53829 YLR269CYLR269C 351 nt2.39□□□□□ -2.03
CAF40P53829 CAT5YOR125C 702 nt2.39□□□□□ -2.03
CAF40P53829 ATP3YBR039W 936 nt2.39□□□□□ -2.03
CAF40P53829 YPL080CYPL080C 327 nt2.39□□□□□ -2.03
CAF40P53829 RPL33AYPL143W 324 nt2.39□□□□□ -2.03
CAF40P53829 snR54snR54 86 nt2.39□□□□□ -2.03
CAF40P53829 YHR214C-CYHR214C-C 1437 nt2.39□□□□□ -2.03
CAF40P53829 SPO23YBR250W 1572 nt2.39□□□□□ -2.03
CAF40P53829 IKI3YLR384C 4050 nt2.39□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 46.4 ms