Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CLTCL1P53675 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CLTCL1P53675 SERF2-207ENST00000409614 582 ntTSL 2 BASIC29.71■■■□□ 2.35
CLTCL1P53675 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC29.71■■■□□ 2.35
CLTCL1P53675 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC29.71■■■□□ 2.35
CLTCL1P53675 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC29.71■■■□□ 2.35
CLTCL1P53675 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CLTCL1P53675 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC29.71■■■□□ 2.35
CLTCL1P53675 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CLTCL1P53675 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CLTCL1P53675 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CLTCL1P53675 MDFI-202ENST00000373050 809 ntTSL 2 BASIC29.71■■■□□ 2.35
CLTCL1P53675 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
CLTCL1P53675 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CLTCL1P53675 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC29.71■■■□□ 2.35
CLTCL1P53675 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC29.71■■■□□ 2.35
CLTCL1P53675 C2orf69P4-201ENST00000565394 541 ntBASIC29.71■■■□□ 2.35
CLTCL1P53675 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CLTCL1P53675 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC29.71■■■□□ 2.35
CLTCL1P53675 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC29.71■■■□□ 2.35
CLTCL1P53675 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
CLTCL1P53675 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
CLTCL1P53675 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
CLTCL1P53675 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
CLTCL1P53675 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
CLTCL1P53675 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC29.7■■■□□ 2.34
CLTCL1P53675 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
CLTCL1P53675 RN7SL471P-201ENST00000580476 299 ntBASIC29.7■■■□□ 2.34
CLTCL1P53675 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
CLTCL1P53675 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.34
CLTCL1P53675 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC29.69■■■□□ 2.34
CLTCL1P53675 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
CLTCL1P53675 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC29.69■■■□□ 2.34
CLTCL1P53675 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
CLTCL1P53675 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC29.69■■■□□ 2.34
CLTCL1P53675 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC29.69■■■□□ 2.34
CLTCL1P53675 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CLTCL1P53675 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC29.69■■■□□ 2.34
CLTCL1P53675 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC29.69■■■□□ 2.34
CLTCL1P53675 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CLTCL1P53675 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC29.69■■■□□ 2.34
CLTCL1P53675 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC29.69■■■□□ 2.34
CLTCL1P53675 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
CLTCL1P53675 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC29.69■■■□□ 2.34
CLTCL1P53675 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC29.69■■■□□ 2.34
CLTCL1P53675 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
CLTCL1P53675 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC29.69■■■□□ 2.34
CLTCL1P53675 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC29.69■■■□□ 2.34
CLTCL1P53675 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CLTCL1P53675 LSR-203ENST00000360798 1963 ntTSL 2 BASIC29.68■■■□□ 2.34
CLTCL1P53675 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC29.68■■■□□ 2.34
CLTCL1P53675 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CLTCL1P53675 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
CLTCL1P53675 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC29.68■■■□□ 2.34
CLTCL1P53675 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CLTCL1P53675 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
CLTCL1P53675 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
CLTCL1P53675 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC29.67■■■□□ 2.34
CLTCL1P53675 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
CLTCL1P53675 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
CLTCL1P53675 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CLTCL1P53675 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC29.67■■■□□ 2.34
CLTCL1P53675 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC29.66■■■□□ 2.34
CLTCL1P53675 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC29.66■■■□□ 2.34
CLTCL1P53675 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC29.66■■■□□ 2.34
CLTCL1P53675 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
CLTCL1P53675 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CLTCL1P53675 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC29.66■■■□□ 2.34
CLTCL1P53675 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
CLTCL1P53675 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CLTCL1P53675 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC29.66■■■□□ 2.34
CLTCL1P53675 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
CLTCL1P53675 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
CLTCL1P53675 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
CLTCL1P53675 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CLTCL1P53675 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
CLTCL1P53675 PGM5P4-201ENST00000421970 445 ntBASIC29.66■■■□□ 2.34
CLTCL1P53675 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
CLTCL1P53675 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC29.66■■■□□ 2.34
CLTCL1P53675 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
CLTCL1P53675 MTDHP1-201ENST00000605323 784 ntBASIC29.66■■■□□ 2.34
CLTCL1P53675 AC124016.1-201ENST00000609552 612 ntBASIC29.66■■■□□ 2.34
CLTCL1P53675 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
CLTCL1P53675 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC29.66■■■□□ 2.34
CLTCL1P53675 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
CLTCL1P53675 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CLTCL1P53675 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
CLTCL1P53675 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
CLTCL1P53675 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CLTCL1P53675 ISG20-202ENST00000379224 540 ntTSL 3 BASIC29.65■■■□□ 2.34
CLTCL1P53675 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CLTCL1P53675 GGT1-206ENST00000404223 952 ntTSL 2 BASIC29.65■■■□□ 2.34
CLTCL1P53675 AC012618.2-201ENST00000428058 849 ntBASIC29.65■■■□□ 2.34
CLTCL1P53675 REXO2-216ENST00000544196 452 ntTSL 3 BASIC29.65■■■□□ 2.34
CLTCL1P53675 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC29.65■■■□□ 2.34
CLTCL1P53675 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CLTCL1P53675 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CLTCL1P53675 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CLTCL1P53675 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CLTCL1P53675 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC29.65■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms