Protein–RNA interactions for Protein: P52798

EFNA4, Ephrin-A4, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4P52798 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFNA4P52798 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFNA4P52798 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
EFNA4P52798 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFNA4P52798 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFNA4P52798 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.3■□□□□ 0.36
EFNA4P52798 UBE2SP1-201ENST00000450587 669 ntBASIC17.3■□□□□ 0.36
EFNA4P52798 RPS2P4-201ENST00000476944 856 ntBASIC17.3■□□□□ 0.36
EFNA4P52798 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
EFNA4P52798 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFNA4P52798 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
EFNA4P52798 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFNA4P52798 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
EFNA4P52798 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFNA4P52798 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
EFNA4P52798 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.29■□□□□ 0.36
EFNA4P52798 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFNA4P52798 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFNA4P52798 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFNA4P52798 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFNA4P52798 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFNA4P52798 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
EFNA4P52798 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.29■□□□□ 0.36
EFNA4P52798 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.29■□□□□ 0.36
EFNA4P52798 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.29■□□□□ 0.36
EFNA4P52798 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFNA4P52798 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFNA4P52798 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFNA4P52798 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.29■□□□□ 0.36
EFNA4P52798 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EFNA4P52798 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EFNA4P52798 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EFNA4P52798 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFNA4P52798 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EFNA4P52798 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.28■□□□□ 0.36
EFNA4P52798 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.28■□□□□ 0.36
EFNA4P52798 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
EFNA4P52798 ECEL1P1-201ENST00000373592 1742 ntBASIC17.28■□□□□ 0.36
EFNA4P52798 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFNA4P52798 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFNA4P52798 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFNA4P52798 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
EFNA4P52798 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.28■□□□□ 0.36
EFNA4P52798 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.28■□□□□ 0.36
EFNA4P52798 AL359736.2-201ENST00000621992 437 ntBASIC17.28■□□□□ 0.36
EFNA4P52798 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
EFNA4P52798 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EFNA4P52798 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.28■□□□□ 0.36
EFNA4P52798 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EFNA4P52798 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EFNA4P52798 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EFNA4P52798 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EFNA4P52798 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
EFNA4P52798 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EFNA4P52798 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EFNA4P52798 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.27■□□□□ 0.36
EFNA4P52798 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.27■□□□□ 0.36
EFNA4P52798 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EFNA4P52798 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.27■□□□□ 0.36
EFNA4P52798 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.27■□□□□ 0.36
EFNA4P52798 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.27■□□□□ 0.36
EFNA4P52798 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.27■□□□□ 0.36
EFNA4P52798 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.27■□□□□ 0.36
EFNA4P52798 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.27■□□□□ 0.36
EFNA4P52798 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.27■□□□□ 0.36
EFNA4P52798 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EFNA4P52798 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EFNA4P52798 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.27■□□□□ 0.36
EFNA4P52798 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.27■□□□□ 0.36
EFNA4P52798 FAM197Y4-202ENST00000622692 608 ntBASIC17.27■□□□□ 0.36
EFNA4P52798 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
EFNA4P52798 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.27■□□□□ 0.36
EFNA4P52798 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
EFNA4P52798 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
EFNA4P52798 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.27■□□□□ 0.35
EFNA4P52798 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EFNA4P52798 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.27■□□□□ 0.35
EFNA4P52798 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EFNA4P52798 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFNA4P52798 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.26■□□□□ 0.35
EFNA4P52798 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
EFNA4P52798 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EFNA4P52798 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFNA4P52798 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.26■□□□□ 0.35
EFNA4P52798 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
EFNA4P52798 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.26■□□□□ 0.35
EFNA4P52798 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFNA4P52798 RPPH1-201ENST00000516869 333 ntBASIC17.26■□□□□ 0.35
EFNA4P52798 C1QBPP2-201ENST00000528754 825 ntBASIC17.26■□□□□ 0.35
EFNA4P52798 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.26■□□□□ 0.35
EFNA4P52798 RN7SL471P-201ENST00000580476 299 ntBASIC17.26■□□□□ 0.35
EFNA4P52798 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.26■□□□□ 0.35
EFNA4P52798 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.26■□□□□ 0.35
EFNA4P52798 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFNA4P52798 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFNA4P52798 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFNA4P52798 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.26■□□□□ 0.35
EFNA4P52798 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFNA4P52798 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EFNA4P52798 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms