Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLK1P49759 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.2■□□□□ 0.66
CLK1P49759 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.2■□□□□ 0.66
CLK1P49759 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLK1P49759 YBX1P1-201ENST00000445822 960 ntBASIC19.2■□□□□ 0.66
CLK1P49759 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.2■□□□□ 0.66
CLK1P49759 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.2■□□□□ 0.66
CLK1P49759 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLK1P49759 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLK1P49759 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CLK1P49759 AC019069.1-201ENST00000610008 1333 ntBASIC19.2■□□□□ 0.66
CLK1P49759 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLK1P49759 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.19■□□□□ 0.66
CLK1P49759 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK1P49759 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLK1P49759 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.19■□□□□ 0.66
CLK1P49759 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK1P49759 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK1P49759 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLK1P49759 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLK1P49759 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.19■□□□□ 0.66
CLK1P49759 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CLK1P49759 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.19■□□□□ 0.66
CLK1P49759 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.19■□□□□ 0.66
CLK1P49759 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.19■□□□□ 0.66
CLK1P49759 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK1P49759 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.19■□□□□ 0.66
CLK1P49759 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLK1P49759 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK1P49759 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
CLK1P49759 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLK1P49759 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CLK1P49759 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLK1P49759 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.18■□□□□ 0.66
CLK1P49759 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.18■□□□□ 0.66
CLK1P49759 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK1P49759 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CLK1P49759 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLK1P49759 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK1P49759 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CLK1P49759 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK1P49759 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK1P49759 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.18■□□□□ 0.66
CLK1P49759 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.18■□□□□ 0.66
CLK1P49759 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK1P49759 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
CLK1P49759 AIRN-201ENST00000601203 4374 ntBASIC19.18■□□□□ 0.66
CLK1P49759 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK1P49759 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLK1P49759 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK1P49759 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.18■□□□□ 0.66
CLK1P49759 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLK1P49759 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CLK1P49759 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.17■□□□□ 0.66
CLK1P49759 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLK1P49759 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLK1P49759 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLK1P49759 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CLK1P49759 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.17■□□□□ 0.66
CLK1P49759 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.17■□□□□ 0.66
CLK1P49759 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.17■□□□□ 0.66
CLK1P49759 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLK1P49759 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLK1P49759 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLK1P49759 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLK1P49759 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLK1P49759 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLK1P49759 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLK1P49759 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.16■□□□□ 0.66
CLK1P49759 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
CLK1P49759 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.16■□□□□ 0.66
CLK1P49759 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CLK1P49759 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
CLK1P49759 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.16■□□□□ 0.66
CLK1P49759 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK1P49759 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK1P49759 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CLK1P49759 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK1P49759 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK1P49759 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.16■□□□□ 0.66
CLK1P49759 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLK1P49759 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CLK1P49759 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.16■□□□□ 0.66
CLK1P49759 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.16■□□□□ 0.66
CLK1P49759 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.16■□□□□ 0.66
CLK1P49759 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.16■□□□□ 0.66
CLK1P49759 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.16■□□□□ 0.66
CLK1P49759 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.16■□□□□ 0.66
CLK1P49759 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK1P49759 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLK1P49759 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLK1P49759 AC003102.1-202ENST00000563394 1796 ntBASIC19.16■□□□□ 0.66
CLK1P49759 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.16■□□□□ 0.66
CLK1P49759 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CLK1P49759 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK1P49759 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK1P49759 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.16■□□□□ 0.66
CLK1P49759 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK1P49759 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.16■□□□□ 0.66
CLK1P49759 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms