Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.89■□□□□ 0.61
SLC1A3P43003 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A3P43003 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.89■□□□□ 0.61
SLC1A3P43003 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A3P43003 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A3P43003 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A3P43003 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A3P43003 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.89■□□□□ 0.61
SLC1A3P43003 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.88■□□□□ 0.61
SLC1A3P43003 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A3P43003 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A3P43003 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A3P43003 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A3P43003 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A3P43003 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC1A3P43003 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.88■□□□□ 0.61
SLC1A3P43003 SLC7A5P1-201ENST00000568957 537 ntBASIC18.88■□□□□ 0.61
SLC1A3P43003 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SLC1A3P43003 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A3P43003 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A3P43003 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.88■□□□□ 0.61
SLC1A3P43003 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC1A3P43003 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A3P43003 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
SLC1A3P43003 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SLC1A3P43003 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A3P43003 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A3P43003 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A3P43003 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
SLC1A3P43003 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A3P43003 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A3P43003 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A3P43003 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A3P43003 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC1A3P43003 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SLC1A3P43003 AC026271.2-201ENST00000428091 497 ntBASIC18.87■□□□□ 0.61
SLC1A3P43003 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC1A3P43003 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A3P43003 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC1A3P43003 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SLC1A3P43003 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A3P43003 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.87■□□□□ 0.61
SLC1A3P43003 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC1A3P43003 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A3P43003 RARRES2P11-201ENST00000635158 484 ntBASIC18.87■□□□□ 0.61
SLC1A3P43003 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A3P43003 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A3P43003 PLK5-205ENST00000642079 1969 ntBASIC18.87■□□□□ 0.61
SLC1A3P43003 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A3P43003 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A3P43003 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A3P43003 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC1A3P43003 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC1A3P43003 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.86■□□□□ 0.61
SLC1A3P43003 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SLC1A3P43003 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SLC1A3P43003 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC1A3P43003 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC1A3P43003 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC1A3P43003 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC1A3P43003 AC006128.1-201ENST00000624704 1661 ntBASIC18.86■□□□□ 0.61
SLC1A3P43003 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC1A3P43003 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC1A3P43003 MIR5787-201ENST00000611784 55 ntBASIC18.86■□□□□ 0.61
SLC1A3P43003 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.86■□□□□ 0.61
SLC1A3P43003 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SLC1A3P43003 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC1A3P43003 GABARAPL3-202ENST00000624044 1851 ntBASIC18.86■□□□□ 0.61
SLC1A3P43003 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC1A3P43003 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.85■□□□□ 0.61
SLC1A3P43003 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A3P43003 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A3P43003 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A3P43003 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A3P43003 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC1A3P43003 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
SLC1A3P43003 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC1A3P43003 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A3P43003 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A3P43003 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A3P43003 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A3P43003 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.85■□□□□ 0.61
SLC1A3P43003 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SLC1A3P43003 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A3P43003 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SLC1A3P43003 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A3P43003 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A3P43003 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A3P43003 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A3P43003 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SLC1A3P43003 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.84■□□□□ 0.61
SLC1A3P43003 AC011484.1-201ENST00000377652 1995 ntBASIC18.84■□□□□ 0.61
SLC1A3P43003 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC1A3P43003 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC1A3P43003 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.84■□□□□ 0.61
SLC1A3P43003 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC1A3P43003 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SLC1A3P43003 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.84■□□□□ 0.61
SLC1A3P43003 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC1A3P43003 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms