Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.47■■□□□ 1.03
SCNN1AP37088 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SCNN1AP37088 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCNN1AP37088 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.47■■□□□ 1.03
SCNN1AP37088 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCNN1AP37088 AC087633.2-202ENST00000565166 1439 ntBASIC21.46■■□□□ 1.03
SCNN1AP37088 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCNN1AP37088 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCNN1AP37088 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
SCNN1AP37088 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SCNN1AP37088 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SCNN1AP37088 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.46■■□□□ 1.03
SCNN1AP37088 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCNN1AP37088 AL512625.2-201ENST00000417533 625 ntBASIC21.46■■□□□ 1.03
SCNN1AP37088 AC133552.2-202ENST00000575694 574 ntBASIC21.46■■□□□ 1.03
SCNN1AP37088 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCNN1AP37088 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.46■■□□□ 1.03
SCNN1AP37088 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCNN1AP37088 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCNN1AP37088 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SCNN1AP37088 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCNN1AP37088 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCNN1AP37088 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SCNN1AP37088 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SCNN1AP37088 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCNN1AP37088 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
SCNN1AP37088 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SCNN1AP37088 AC092666.2-201ENST00000613287 246 ntBASIC21.45■■□□□ 1.02
SCNN1AP37088 AC008694.1-202ENST00000636953 945 ntBASIC21.45■■□□□ 1.02
SCNN1AP37088 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCNN1AP37088 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCNN1AP37088 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCNN1AP37088 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SCNN1AP37088 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.45■■□□□ 1.02
SCNN1AP37088 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCNN1AP37088 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SCNN1AP37088 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.44■■□□□ 1.02
SCNN1AP37088 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
SCNN1AP37088 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SCNN1AP37088 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCNN1AP37088 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.44■■□□□ 1.02
SCNN1AP37088 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCNN1AP37088 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCNN1AP37088 MCRIP2P1-201ENST00000394346 511 ntBASIC21.44■■□□□ 1.02
SCNN1AP37088 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.44■■□□□ 1.02
SCNN1AP37088 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.44■■□□□ 1.02
SCNN1AP37088 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SCNN1AP37088 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCNN1AP37088 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCNN1AP37088 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SCNN1AP37088 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.44■■□□□ 1.02
SCNN1AP37088 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SCNN1AP37088 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SCNN1AP37088 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SCNN1AP37088 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SCNN1AP37088 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
SCNN1AP37088 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.43■■□□□ 1.02
SCNN1AP37088 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SCNN1AP37088 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SCNN1AP37088 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.43■■□□□ 1.02
SCNN1AP37088 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCNN1AP37088 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCNN1AP37088 KRT8P36-201ENST00000489121 1440 ntBASIC21.43■■□□□ 1.02
SCNN1AP37088 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.43■■□□□ 1.02
SCNN1AP37088 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCNN1AP37088 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCNN1AP37088 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SCNN1AP37088 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCNN1AP37088 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCNN1AP37088 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SCNN1AP37088 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SCNN1AP37088 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SCNN1AP37088 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SCNN1AP37088 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.42■■□□□ 1.02
SCNN1AP37088 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.42■■□□□ 1.02
SCNN1AP37088 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.42■■□□□ 1.02
SCNN1AP37088 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SCNN1AP37088 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.42■■□□□ 1.02
SCNN1AP37088 FP700111.2-201ENST00000619190 1892 ntBASIC21.42■■□□□ 1.02
SCNN1AP37088 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
SCNN1AP37088 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
SCNN1AP37088 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCNN1AP37088 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCNN1AP37088 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.41■■□□□ 1.02
SCNN1AP37088 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SCNN1AP37088 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCNN1AP37088 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCNN1AP37088 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCNN1AP37088 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCNN1AP37088 CROCCP5-201ENST00000436658 830 ntBASIC21.41■■□□□ 1.02
SCNN1AP37088 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.41■■□□□ 1.02
SCNN1AP37088 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SCNN1AP37088 AL050303.2-201ENST00000619798 666 ntBASIC21.41■■□□□ 1.02
SCNN1AP37088 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
SCNN1AP37088 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.41■■□□□ 1.02
SCNN1AP37088 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.41■■□□□ 1.02
SCNN1AP37088 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCNN1AP37088 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCNN1AP37088 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.4■■□□□ 1.02
SCNN1AP37088 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms