Protein–RNA interactions for Protein: P32561

RPD3, Histone deacetylase RPD3, yeastyeast

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPD3P32561 YFL032WYFL032W 321 nt3.37□□□□□ -1.87
RPD3P32561 YHR214C-EYHR214C-E 300 nt3.37□□□□□ -1.87
RPD3P32561 YAR070CYAR070C 300 nt3.37□□□□□ -1.87
RPD3P32561 PRE8YML092C 753 nt3.37□□□□□ -1.87
RPD3P32561 YBL108WYBL108W 306 nt3.37□□□□□ -1.87
RPD3P32561 TIM18YOR297C 579 nt3.37□□□□□ -1.87
RPD3P32561 ETP1YHL010C 1758 nt3.37□□□□□ -1.87
RPD3P32561 SPT4YGR063C 309 nt3.36□□□□□ -1.87
RPD3P32561 YHR063W-AYHR063W-A 336 nt3.36□□□□□ -1.87
RPD3P32561 YHR139C-AYHR139C-A 312 nt3.36□□□□□ -1.87
RPD3P32561 YMR290W-AYMR290W-A 348 nt3.36□□□□□ -1.87
RPD3P32561 ROX1YPR065W 1107 nt3.36□□□□□ -1.87
RPD3P32561 STE5YDR103W 2754 nt3.36□□□□□ -1.87
RPD3P32561 SNF12YNR023W 1701 nt3.36□□□□□ -1.87
RPD3P32561 RNR1YER070W 2667 nt3.36□□□□□ -1.87
RPD3P32561 RPN2YIL075C 2838 nt3.35□□□□□ -1.87
RPD3P32561 JEN1YKL217W 1851 nt3.35□□□□□ -1.87
RPD3P32561 RRN6YBL014C 2685 nt3.35□□□□□ -1.87
RPD3P32561 MNT3YIL014W 1893 nt3.35□□□□□ -1.87
RPD3P32561 STN1YDR082W 1485 nt3.35□□□□□ -1.87
RPD3P32561 SQS1YNL224C 2304 nt3.35□□□□□ -1.87
RPD3P32561 NDD1YOR372C 1665 nt3.34□□□□□ -1.87
RPD3P32561 PDC2YDR081C 2778 nt3.34□□□□□ -1.87
RPD3P32561 DNM1YLL001W 2274 nt3.34□□□□□ -1.87
RPD3P32561 YER107W-AYER107W-A 321 nt3.34□□□□□ -1.87
RPD3P32561 MSL1YIR009W 336 nt3.34□□□□□ -1.87
RPD3P32561 LSM8YJR022W 330 nt3.34□□□□□ -1.87
RPD3P32561 snR36snR36 182 nt3.34□□□□□ -1.87
RPD3P32561 SNX41YDR425W 1878 nt3.34□□□□□ -1.87
RPD3P32561 FLO9YAL063C 3969 nt3.34□□□□□ -1.88
RPD3P32561 RAD4YER162C 2265 nt3.33□□□□□ -1.88
RPD3P32561 OSH3YHR073W 2991 nt3.33□□□□□ -1.88
RPD3P32561 TRZ1YKR079C 2517 nt3.33□□□□□ -1.88
RPD3P32561 AIP1YMR092C 1848 nt3.33□□□□□ -1.88
RPD3P32561 GSC2YGR032W 5688 nt3.33□□□□□ -1.88
RPD3P32561 BNI4YNL233W 2679 nt3.33□□□□□ -1.88
RPD3P32561 SPC105YGL093W 2754 nt3.33□□□□□ -1.88
RPD3P32561 RSC1YGR056W 2787 nt3.33□□□□□ -1.88
RPD3P32561 FAT1YBR041W 2010 nt3.33□□□□□ -1.88
RPD3P32561 APE2YKL157W 2859 nt3.33□□□□□ -1.88
RPD3P32561 SPG3YDR504C 384 nt3.33□□□□□ -1.88
RPD3P32561 AAD16YFL057C 459 nt3.33□□□□□ -1.88
RPD3P32561 YGL074CYGL074C 327 nt3.33□□□□□ -1.88
RPD3P32561 BAT1YHR208W 1182 nt3.33□□□□□ -1.88
RPD3P32561 SHE2YKL130C 741 nt3.33□□□□□ -1.88
RPD3P32561 YMR320WYMR320W 306 nt3.33□□□□□ -1.88
RPD3P32561 RFC3YNL290W 1023 nt3.33□□□□□ -1.88
RPD3P32561 TFB1YDR311W 1929 nt3.32□□□□□ -1.88
RPD3P32561 VBA4YDR119W 2307 nt3.32□□□□□ -1.88
RPD3P32561 MSH2YOL090W 2895 nt3.32□□□□□ -1.88
RPD3P32561 RMT2YDR465C 1239 nt3.32□□□□□ -1.88
RPD3P32561 URM1YIL008W 300 nt3.32□□□□□ -1.88
RPD3P32561 LSM1YJL124C 519 nt3.32□□□□□ -1.88
RPD3P32561 BIT61YJL058C 1632 nt3.32□□□□□ -1.88
RPD3P32561 KIN2YLR096W 3444 nt3.32□□□□□ -1.88
RPD3P32561 MSK1YNL073W 1731 nt3.31□□□□□ -1.88
RPD3P32561 YEL057CYEL057C 702 nt3.31□□□□□ -1.88
RPD3P32561 SOD1YJR104C 465 nt3.31□□□□□ -1.88
RPD3P32561 NUP159YIL115C 4383 nt3.31□□□□□ -1.88
RPD3P32561 RSF2YJR127C 4143 nt3.3□□□□□ -1.88
RPD3P32561 YDR183C-AYDR183C-A 258 nt3.3□□□□□ -1.88
RPD3P32561 tT(UGU)Q1tT(UGU)Q1 76 nt3.3□□□□□ -1.88
RPD3P32561 YJL202CYJL202C 348 nt3.3□□□□□ -1.88
RPD3P32561 RPL9BYNL067W 576 nt3.3□□□□□ -1.88
RPD3P32561 SSM4YIL030C 3960 nt3.3□□□□□ -1.88
RPD3P32561 SSY1YDR160W 2559 nt3.29□□□□□ -1.88
RPD3P32561 USA1YML029W 2517 nt3.29□□□□□ -1.88
RPD3P32561 YNR065CYNR065C 3351 nt3.29□□□□□ -1.88
RPD3P32561 YDR250CYDR250C 276 nt3.29□□□□□ -1.88
RPD3P32561 COX23YHR116W 456 nt3.29□□□□□ -1.88
RPD3P32561 snR191snR191 274 nt3.29□□□□□ -1.88
RPD3P32561 CAJ1YER048C 1176 nt3.28□□□□□ -1.88
RPD3P32561 YGR051CYGR051C 324 nt3.28□□□□□ -1.88
RPD3P32561 YHL006W-AYHL006W-A 354 nt3.28□□□□□ -1.88
RPD3P32561 YLR031WYLR031W 561 nt3.28□□□□□ -1.88
RPD3P32561 TIM12YBR091C 330 nt3.28□□□□□ -1.88
RPD3P32561 PFK26YIL107C 2484 nt3.28□□□□□ -1.88
RPD3P32561 VPS3YDR495C 3036 nt3.27□□□□□ -1.89
RPD3P32561 APC11YDL008W 498 nt3.27□□□□□ -1.89
RPD3P32561 TMA17YDL110C 453 nt3.27□□□□□ -1.89
RPD3P32561 YDR230WYDR230W 348 nt3.27□□□□□ -1.89
RPD3P32561 HMF1YER057C 390 nt3.27□□□□□ -1.89
RPD3P32561 YFR056CYFR056C 369 nt3.27□□□□□ -1.89
RPD3P32561 YML116W-AYML116W-A 303 nt3.27□□□□□ -1.89
RPD3P32561 YNL337WYNL337W 255 nt3.27□□□□□ -1.89
RPD3P32561 YPR010C-AYPR010C-A 219 nt3.27□□□□□ -1.89
RPD3P32561 ALA1YOR335C 2877 nt3.27□□□□□ -1.89
RPD3P32561 MYO5YMR109W 3660 nt3.27□□□□□ -1.89
RPD3P32561 SIP3YNL257C 3690 nt3.27□□□□□ -1.89
RPD3P32561 MTR4YJL050W 3222 nt3.27□□□□□ -1.89
RPD3P32561 YER039C-AYER039C-A 219 nt3.26□□□□□ -1.89
RPD3P32561 YFL065CYFL065C 309 nt3.26□□□□□ -1.89
RPD3P32561 tM(CAU)Q1tM(CAU)Q1 76 nt3.26□□□□□ -1.89
RPD3P32561 TIM8YJR135W-A 264 nt3.26□□□□□ -1.89
RPD3P32561 SSN8YNL025C 972 nt3.26□□□□□ -1.89
RPD3P32561 YPR022CYPR022C 3402 nt3.26□□□□□ -1.89
RPD3P32561 YLR352WYLR352W 2424 nt3.25□□□□□ -1.89
RPD3P32561 DAN4YJR151C 3486 nt3.25□□□□□ -1.89
RPD3P32561 HPA3YEL066W 540 nt3.25□□□□□ -1.89
RPD3P32561 tW(UCA)QtW(UCA)Q 74 nt3.25□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms