Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.27■□□□□ 0.36
LMO1P25800 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMO1P25800 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
LMO1P25800 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMO1P25800 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMO1P25800 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMO1P25800 AC034268.1-201ENST00000441047 882 ntBASIC17.27■□□□□ 0.36
LMO1P25800 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LMO1P25800 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LMO1P25800 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.27■□□□□ 0.36
LMO1P25800 KRT18P61-201ENST00000585825 1298 ntBASIC17.27■□□□□ 0.36
LMO1P25800 MIR5787-201ENST00000611784 55 ntBASIC17.27■□□□□ 0.36
LMO1P25800 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.27■□□□□ 0.36
LMO1P25800 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMO1P25800 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.27■□□□□ 0.35
LMO1P25800 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.27■□□□□ 0.35
LMO1P25800 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LMO1P25800 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
LMO1P25800 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LMO1P25800 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
LMO1P25800 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
LMO1P25800 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
LMO1P25800 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LMO1P25800 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.27■□□□□ 0.35
LMO1P25800 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
LMO1P25800 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
LMO1P25800 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
LMO1P25800 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LMO1P25800 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LMO1P25800 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LMO1P25800 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LMO1P25800 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LMO1P25800 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
LMO1P25800 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.26■□□□□ 0.35
LMO1P25800 AC116050.2-201ENST00000612102 1779 ntBASIC17.26■□□□□ 0.35
LMO1P25800 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LMO1P25800 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LMO1P25800 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.26■□□□□ 0.35
LMO1P25800 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.26■□□□□ 0.35
LMO1P25800 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LMO1P25800 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LMO1P25800 RBM17P2-201ENST00000616397 1405 ntBASIC17.26■□□□□ 0.35
LMO1P25800 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.26■□□□□ 0.35
LMO1P25800 GABARAPL3-202ENST00000624044 1851 ntBASIC17.26■□□□□ 0.35
LMO1P25800 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LMO1P25800 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LMO1P25800 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LMO1P25800 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LMO1P25800 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LMO1P25800 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LMO1P25800 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.25■□□□□ 0.35
LMO1P25800 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LMO1P25800 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMO1P25800 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMO1P25800 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.25■□□□□ 0.35
LMO1P25800 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
LMO1P25800 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMO1P25800 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMO1P25800 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.25■□□□□ 0.35
LMO1P25800 AP005212.1-201ENST00000581547 1997 ntBASIC17.25■□□□□ 0.35
LMO1P25800 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LMO1P25800 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.25■□□□□ 0.35
LMO1P25800 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMO1P25800 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.25■□□□□ 0.35
LMO1P25800 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMO1P25800 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LMO1P25800 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.25■□□□□ 0.35
LMO1P25800 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO1P25800 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.24■□□□□ 0.35
LMO1P25800 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.24■□□□□ 0.35
LMO1P25800 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.24■□□□□ 0.35
LMO1P25800 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
LMO1P25800 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO1P25800 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
LMO1P25800 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO1P25800 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO1P25800 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.24■□□□□ 0.35
LMO1P25800 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.24■□□□□ 0.35
LMO1P25800 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.24■□□□□ 0.35
LMO1P25800 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.24■□□□□ 0.35
LMO1P25800 NTF6G-201ENST00000591094 616 ntBASIC17.24■□□□□ 0.35
LMO1P25800 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.24■□□□□ 0.35
LMO1P25800 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.24■□□□□ 0.35
LMO1P25800 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.24■□□□□ 0.35
LMO1P25800 AC027702.1-201ENST00000563810 1770 ntBASIC17.24■□□□□ 0.35
LMO1P25800 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO1P25800 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.24■□□□□ 0.35
LMO1P25800 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LMO1P25800 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.24■□□□□ 0.35
LMO1P25800 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO1P25800 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO1P25800 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LMO1P25800 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LMO1P25800 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.23■□□□□ 0.35
LMO1P25800 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.23■□□□□ 0.35
LMO1P25800 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LMO1P25800 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LMO1P25800 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LMO1P25800 AC091799.1-201ENST00000422823 811 ntBASIC17.23■□□□□ 0.35
LMO1P25800 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms