Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP11P24347 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP11P24347 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP11P24347 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP11P24347 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP11P24347 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP11P24347 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MMP11P24347 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
MMP11P24347 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MMP11P24347 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MMP11P24347 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
MMP11P24347 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.52■□□□□ 0.72
MMP11P24347 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
MMP11P24347 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MMP11P24347 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.52■□□□□ 0.72
MMP11P24347 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MMP11P24347 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MMP11P24347 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
MMP11P24347 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.52■□□□□ 0.72
MMP11P24347 AC098934.4-201ENST00000564127 592 ntBASIC19.52■□□□□ 0.72
MMP11P24347 AC092118.2-201ENST00000613495 667 ntBASIC19.52■□□□□ 0.72
MMP11P24347 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
MMP11P24347 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MMP11P24347 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MMP11P24347 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MMP11P24347 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MMP11P24347 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
MMP11P24347 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.52■□□□□ 0.71
MMP11P24347 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MMP11P24347 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MMP11P24347 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MMP11P24347 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.51■□□□□ 0.71
MMP11P24347 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.51■□□□□ 0.71
MMP11P24347 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MMP11P24347 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.51■□□□□ 0.71
MMP11P24347 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MMP11P24347 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.51■□□□□ 0.71
MMP11P24347 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MMP11P24347 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MMP11P24347 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MMP11P24347 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
MMP11P24347 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MMP11P24347 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MMP11P24347 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
MMP11P24347 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.51■□□□□ 0.71
MMP11P24347 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MMP11P24347 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MMP11P24347 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MMP11P24347 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
MMP11P24347 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.5■□□□□ 0.71
MMP11P24347 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MMP11P24347 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.5■□□□□ 0.71
MMP11P24347 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
MMP11P24347 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MMP11P24347 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MMP11P24347 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.5■□□□□ 0.71
MMP11P24347 BX276092.2-201ENST00000417668 665 ntBASIC19.5■□□□□ 0.71
MMP11P24347 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.5■□□□□ 0.71
MMP11P24347 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MMP11P24347 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.5■□□□□ 0.71
MMP11P24347 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.5■□□□□ 0.71
MMP11P24347 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.5■□□□□ 0.71
MMP11P24347 SLC25A24-204ENST00000569674 2357 ntBASIC19.5■□□□□ 0.71
MMP11P24347 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MMP11P24347 AC010980.2-201ENST00000587099 1412 ntBASIC19.5■□□□□ 0.71
MMP11P24347 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MMP11P24347 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
MMP11P24347 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.49■□□□□ 0.71
MMP11P24347 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
MMP11P24347 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
MMP11P24347 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
MMP11P24347 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.49■□□□□ 0.71
MMP11P24347 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MMP11P24347 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MMP11P24347 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
MMP11P24347 AC091799.1-201ENST00000422823 811 ntBASIC19.49■□□□□ 0.71
MMP11P24347 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.49■□□□□ 0.71
MMP11P24347 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MMP11P24347 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.49■□□□□ 0.71
MMP11P24347 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.49■□□□□ 0.71
MMP11P24347 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MMP11P24347 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MMP11P24347 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MMP11P24347 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MMP11P24347 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
MMP11P24347 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MMP11P24347 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MMP11P24347 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MMP11P24347 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.48■□□□□ 0.71
MMP11P24347 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.48■□□□□ 0.71
MMP11P24347 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MMP11P24347 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.48■□□□□ 0.71
MMP11P24347 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.48■□□□□ 0.71
MMP11P24347 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MMP11P24347 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MMP11P24347 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
MMP11P24347 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MMP11P24347 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
MMP11P24347 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MMP11P24347 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms