Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
XPAP23025 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.74■□□□□ 0.91
XPAP23025 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
XPAP23025 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
XPAP23025 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
XPAP23025 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
XPAP23025 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
XPAP23025 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
XPAP23025 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.74■□□□□ 0.91
XPAP23025 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.74■□□□□ 0.91
XPAP23025 AL138781.1-201ENST00000566567 1274 ntBASIC20.74■□□□□ 0.91
XPAP23025 MIR4758-201ENST00000577688 71 ntBASIC20.74■□□□□ 0.91
XPAP23025 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
XPAP23025 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.74■□□□□ 0.91
XPAP23025 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
XPAP23025 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
XPAP23025 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
XPAP23025 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.74■□□□□ 0.91
XPAP23025 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
XPAP23025 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
XPAP23025 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
XPAP23025 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
XPAP23025 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
XPAP23025 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
XPAP23025 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
XPAP23025 MIPEPP3-201ENST00000412105 444 ntBASIC20.73■□□□□ 0.91
XPAP23025 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.73■□□□□ 0.91
XPAP23025 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.73■□□□□ 0.91
XPAP23025 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
XPAP23025 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
XPAP23025 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.73■□□□□ 0.91
XPAP23025 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
XPAP23025 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
XPAP23025 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
XPAP23025 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
XPAP23025 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
XPAP23025 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
XPAP23025 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
XPAP23025 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
XPAP23025 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.72■□□□□ 0.91
XPAP23025 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
XPAP23025 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
XPAP23025 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.72■□□□□ 0.91
XPAP23025 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.72■□□□□ 0.91
XPAP23025 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.72■□□□□ 0.91
XPAP23025 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.72■□□□□ 0.91
XPAP23025 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.72■□□□□ 0.91
XPAP23025 AC142086.2-201ENST00000569753 217 ntBASIC20.72■□□□□ 0.91
XPAP23025 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.72■□□□□ 0.91
XPAP23025 AC133041.1-202ENST00000642053 222 ntBASIC20.72■□□□□ 0.91
XPAP23025 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.72■□□□□ 0.91
XPAP23025 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
XPAP23025 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
XPAP23025 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.72■□□□□ 0.91
XPAP23025 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
XPAP23025 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
XPAP23025 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
XPAP23025 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
XPAP23025 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
XPAP23025 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
XPAP23025 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
XPAP23025 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
XPAP23025 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
XPAP23025 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
XPAP23025 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.71■□□□□ 0.91
XPAP23025 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
XPAP23025 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
XPAP23025 LSM12P1-201ENST00000411836 588 ntBASIC20.71■□□□□ 0.91
XPAP23025 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.71■□□□□ 0.91
XPAP23025 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.71■□□□□ 0.91
XPAP23025 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.71■□□□□ 0.91
XPAP23025 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.71■□□□□ 0.91
XPAP23025 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.71■□□□□ 0.91
XPAP23025 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.71■□□□□ 0.91
XPAP23025 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
XPAP23025 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.71■□□□□ 0.91
XPAP23025 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
XPAP23025 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.71■□□□□ 0.91
XPAP23025 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
XPAP23025 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
XPAP23025 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
XPAP23025 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
XPAP23025 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
XPAP23025 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.7■□□□□ 0.9
XPAP23025 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.7■□□□□ 0.9
XPAP23025 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
XPAP23025 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
XPAP23025 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.7■□□□□ 0.9
XPAP23025 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
XPAP23025 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
XPAP23025 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
XPAP23025 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
XPAP23025 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
XPAP23025 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.7■□□□□ 0.9
XPAP23025 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.7■□□□□ 0.9
XPAP23025 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
XPAP23025 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.7■□□□□ 0.9
XPAP23025 AC100791.3-201ENST00000617619 330 ntBASIC20.7■□□□□ 0.9
XPAP23025 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.7■□□□□ 0.9
XPAP23025 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms