Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 AC007322.3-201ENST00000426526 701 ntBASIC18.88■□□□□ 0.61
RPS4Y1P22090 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPS4Y1P22090 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.88■□□□□ 0.61
RPS4Y1P22090 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.88■□□□□ 0.61
RPS4Y1P22090 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.88■□□□□ 0.61
RPS4Y1P22090 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS4Y1P22090 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPS4Y1P22090 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS4Y1P22090 AL162377.1-201ENST00000618844 1793 ntBASIC18.88■□□□□ 0.61
RPS4Y1P22090 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.88■□□□□ 0.61
RPS4Y1P22090 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
RPS4Y1P22090 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPS4Y1P22090 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RPS4Y1P22090 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPS4Y1P22090 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.87■□□□□ 0.61
RPS4Y1P22090 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
RPS4Y1P22090 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RPS4Y1P22090 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
RPS4Y1P22090 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.87■□□□□ 0.61
RPS4Y1P22090 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.87■□□□□ 0.61
RPS4Y1P22090 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RPS4Y1P22090 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPS4Y1P22090 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
RPS4Y1P22090 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y1P22090 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.86■□□□□ 0.61
RPS4Y1P22090 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y1P22090 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y1P22090 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.86■□□□□ 0.61
RPS4Y1P22090 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y1P22090 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
RPS4Y1P22090 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.86■□□□□ 0.61
RPS4Y1P22090 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
RPS4Y1P22090 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RPS4Y1P22090 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y1P22090 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y1P22090 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y1P22090 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RPS4Y1P22090 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.86■□□□□ 0.61
RPS4Y1P22090 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y1P22090 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y1P22090 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.86■□□□□ 0.61
RPS4Y1P22090 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y1P22090 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RPS4Y1P22090 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.86■□□□□ 0.61
RPS4Y1P22090 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.86■□□□□ 0.61
RPS4Y1P22090 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y1P22090 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y1P22090 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RPS4Y1P22090 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y1P22090 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y1P22090 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RPS4Y1P22090 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.86■□□□□ 0.61
RPS4Y1P22090 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4Y1P22090 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4Y1P22090 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.85■□□□□ 0.61
RPS4Y1P22090 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4Y1P22090 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
RPS4Y1P22090 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4Y1P22090 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.85■□□□□ 0.61
RPS4Y1P22090 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.85■□□□□ 0.61
RPS4Y1P22090 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.85■□□□□ 0.61
RPS4Y1P22090 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4Y1P22090 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RPS4Y1P22090 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4Y1P22090 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.85■□□□□ 0.61
RPS4Y1P22090 AC026271.2-201ENST00000428091 497 ntBASIC18.85■□□□□ 0.61
RPS4Y1P22090 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.85■□□□□ 0.61
RPS4Y1P22090 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.85■□□□□ 0.61
RPS4Y1P22090 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.85■□□□□ 0.61
RPS4Y1P22090 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.85■□□□□ 0.61
RPS4Y1P22090 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RPS4Y1P22090 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4Y1P22090 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.85■□□□□ 0.61
RPS4Y1P22090 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.85■□□□□ 0.61
RPS4Y1P22090 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4Y1P22090 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4Y1P22090 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4Y1P22090 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4Y1P22090 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4Y1P22090 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4Y1P22090 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RPS4Y1P22090 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.84■□□□□ 0.61
RPS4Y1P22090 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.84■□□□□ 0.61
RPS4Y1P22090 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.84■□□□□ 0.61
RPS4Y1P22090 KRT18P5-201ENST00000436075 1291 ntBASIC18.84■□□□□ 0.61
RPS4Y1P22090 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4Y1P22090 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.84■□□□□ 0.61
RPS4Y1P22090 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4Y1P22090 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4Y1P22090 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4Y1P22090 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.84■□□□□ 0.61
RPS4Y1P22090 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RPS4Y1P22090 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4Y1P22090 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RPS4Y1P22090 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RPS4Y1P22090 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPS4Y1P22090 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPS4Y1P22090 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RPS4Y1P22090 AL512408.1-201ENST00000569378 2000 ntBASIC18.83■□□□□ 0.61
RPS4Y1P22090 AC092720.2-201ENST00000602388 1665 ntBASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms