Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CAPN3P20807 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN3P20807 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.76■□□□□ 0.75
CAPN3P20807 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN3P20807 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN3P20807 AC099778.1-201ENST00000568593 1911 ntBASIC19.76■□□□□ 0.75
CAPN3P20807 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.76■□□□□ 0.75
CAPN3P20807 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.76■□□□□ 0.75
CAPN3P20807 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN3P20807 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN3P20807 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CAPN3P20807 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
CAPN3P20807 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.76■□□□□ 0.75
CAPN3P20807 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.76■□□□□ 0.75
CAPN3P20807 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN3P20807 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.76■□□□□ 0.75
CAPN3P20807 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN3P20807 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.76■□□□□ 0.75
CAPN3P20807 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.76■□□□□ 0.75
CAPN3P20807 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN3P20807 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN3P20807 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN3P20807 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN3P20807 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN3P20807 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN3P20807 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN3P20807 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN3P20807 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.75■□□□□ 0.75
CAPN3P20807 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN3P20807 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN3P20807 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN3P20807 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.75■□□□□ 0.75
CAPN3P20807 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.75■□□□□ 0.75
CAPN3P20807 AC126544.1-201ENST00000580842 1059 ntBASIC19.75■□□□□ 0.75
CAPN3P20807 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.75■□□□□ 0.75
CAPN3P20807 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN3P20807 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.75■□□□□ 0.75
CAPN3P20807 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN3P20807 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CAPN3P20807 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN3P20807 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN3P20807 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN3P20807 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.75■□□□□ 0.75
CAPN3P20807 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.75■□□□□ 0.75
CAPN3P20807 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN3P20807 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN3P20807 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.74■□□□□ 0.75
CAPN3P20807 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.74■□□□□ 0.75
CAPN3P20807 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.74■□□□□ 0.75
CAPN3P20807 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN3P20807 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN3P20807 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN3P20807 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.74■□□□□ 0.75
CAPN3P20807 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN3P20807 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.74■□□□□ 0.75
CAPN3P20807 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN3P20807 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CAPN3P20807 AC092437.1-201ENST00000624794 1048 ntBASIC19.74■□□□□ 0.75
CAPN3P20807 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CAPN3P20807 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CAPN3P20807 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN3P20807 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.74■□□□□ 0.75
CAPN3P20807 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.74■□□□□ 0.75
CAPN3P20807 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CAPN3P20807 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN3P20807 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.73■□□□□ 0.75
CAPN3P20807 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN3P20807 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN3P20807 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN3P20807 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN3P20807 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN3P20807 AC004911.1-201ENST00000416316 871 ntBASIC19.73■□□□□ 0.75
CAPN3P20807 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.73■□□□□ 0.75
CAPN3P20807 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.73■□□□□ 0.75
CAPN3P20807 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.73■□□□□ 0.75
CAPN3P20807 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.73■□□□□ 0.75
CAPN3P20807 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.73■□□□□ 0.75
CAPN3P20807 AC011484.1-201ENST00000377652 1995 ntBASIC19.73■□□□□ 0.75
CAPN3P20807 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN3P20807 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN3P20807 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN3P20807 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN3P20807 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN3P20807 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN3P20807 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN3P20807 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.72■□□□□ 0.75
CAPN3P20807 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN3P20807 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.72■□□□□ 0.75
CAPN3P20807 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN3P20807 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.72■□□□□ 0.75
CAPN3P20807 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CAPN3P20807 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN3P20807 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN3P20807 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CAPN3P20807 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CAPN3P20807 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.72■□□□□ 0.75
CAPN3P20807 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN3P20807 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN3P20807 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN3P20807 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms