Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.93■□□□□ 0.94
NFKB1P19838 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NFKB1P19838 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NFKB1P19838 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NFKB1P19838 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
NFKB1P19838 AC010536.3-201ENST00000620306 533 ntBASIC20.93■□□□□ 0.94
NFKB1P19838 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NFKB1P19838 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NFKB1P19838 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NFKB1P19838 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NFKB1P19838 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.93■□□□□ 0.94
NFKB1P19838 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
NFKB1P19838 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.93■□□□□ 0.94
NFKB1P19838 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
NFKB1P19838 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NFKB1P19838 AC073314.1-201ENST00000568729 2216 ntBASIC20.92■□□□□ 0.94
NFKB1P19838 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.92■□□□□ 0.94
NFKB1P19838 AC016769.1-201ENST00000409132 1010 ntBASIC20.92■□□□□ 0.94
NFKB1P19838 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NFKB1P19838 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.92■□□□□ 0.94
NFKB1P19838 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NFKB1P19838 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
NFKB1P19838 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.92■□□□□ 0.94
NFKB1P19838 AC027702.1-201ENST00000563810 1770 ntBASIC20.92■□□□□ 0.94
NFKB1P19838 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NFKB1P19838 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NFKB1P19838 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NFKB1P19838 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NFKB1P19838 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.91■□□□□ 0.94
NFKB1P19838 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
NFKB1P19838 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NFKB1P19838 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NFKB1P19838 MIR935-201ENST00000401179 91 ntBASIC20.91■□□□□ 0.94
NFKB1P19838 AC092667.1-201ENST00000434301 2586 ntBASIC20.91■□□□□ 0.94
NFKB1P19838 KRT18P11-201ENST00000435214 1283 ntBASIC20.91■□□□□ 0.94
NFKB1P19838 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NFKB1P19838 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
NFKB1P19838 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.91■□□□□ 0.94
NFKB1P19838 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
NFKB1P19838 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
NFKB1P19838 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NFKB1P19838 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.91■□□□□ 0.94
NFKB1P19838 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NFKB1P19838 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NFKB1P19838 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NFKB1P19838 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.9■□□□□ 0.94
NFKB1P19838 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NFKB1P19838 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NFKB1P19838 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.9■□□□□ 0.94
NFKB1P19838 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NFKB1P19838 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NFKB1P19838 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
NFKB1P19838 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
NFKB1P19838 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NFKB1P19838 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NFKB1P19838 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.9■□□□□ 0.94
NFKB1P19838 TERF1P5-201ENST00000477545 1207 ntBASIC20.9■□□□□ 0.94
NFKB1P19838 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NFKB1P19838 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.9■□□□□ 0.94
NFKB1P19838 MFSD11-216ENST00000590393 1141 ntBASIC20.9■□□□□ 0.94
NFKB1P19838 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.9■□□□□ 0.94
NFKB1P19838 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NFKB1P19838 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.9■□□□□ 0.94
NFKB1P19838 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
NFKB1P19838 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NFKB1P19838 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NFKB1P19838 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NFKB1P19838 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NFKB1P19838 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
NFKB1P19838 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NFKB1P19838 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NFKB1P19838 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
NFKB1P19838 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NFKB1P19838 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
NFKB1P19838 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
NFKB1P19838 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
NFKB1P19838 AP005212.1-201ENST00000581547 1997 ntBASIC20.89■□□□□ 0.93
NFKB1P19838 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NFKB1P19838 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NFKB1P19838 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
NFKB1P19838 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.89■□□□□ 0.93
NFKB1P19838 AC007322.3-201ENST00000426526 701 ntBASIC20.89■□□□□ 0.93
NFKB1P19838 AC006015.1-201ENST00000429970 570 ntBASIC20.89■□□□□ 0.93
NFKB1P19838 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NFKB1P19838 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
NFKB1P19838 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
NFKB1P19838 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.89■□□□□ 0.93
NFKB1P19838 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.89■□□□□ 0.93
NFKB1P19838 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NFKB1P19838 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NFKB1P19838 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NFKB1P19838 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NFKB1P19838 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
NFKB1P19838 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NFKB1P19838 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NFKB1P19838 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NFKB1P19838 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NFKB1P19838 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NFKB1P19838 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NFKB1P19838 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms