Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ATF4P18848 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATF4P18848 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ATF4P18848 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATF4P18848 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.11■□□□□ 0.33
ATF4P18848 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATF4P18848 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.11■□□□□ 0.33
ATF4P18848 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.11■□□□□ 0.33
ATF4P18848 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.11■□□□□ 0.33
ATF4P18848 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATF4P18848 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATF4P18848 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATF4P18848 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATF4P18848 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATF4P18848 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATF4P18848 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATF4P18848 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATF4P18848 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.1■□□□□ 0.33
ATF4P18848 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATF4P18848 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATF4P18848 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATF4P18848 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATF4P18848 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.1■□□□□ 0.33
ATF4P18848 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
ATF4P18848 AL356441.2-201ENST00000443009 864 ntBASIC17.1■□□□□ 0.33
ATF4P18848 AC239859.2-201ENST00000444165 318 ntBASIC17.1■□□□□ 0.33
ATF4P18848 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.1■□□□□ 0.33
ATF4P18848 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ATF4P18848 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
ATF4P18848 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ATF4P18848 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATF4P18848 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATF4P18848 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATF4P18848 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATF4P18848 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATF4P18848 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
ATF4P18848 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATF4P18848 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.1■□□□□ 0.33
ATF4P18848 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
ATF4P18848 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF4P18848 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATF4P18848 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ATF4P18848 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATF4P18848 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF4P18848 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF4P18848 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF4P18848 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF4P18848 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF4P18848 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF4P18848 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF4P18848 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ATF4P18848 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF4P18848 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF4P18848 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ATF4P18848 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.09■□□□□ 0.33
ATF4P18848 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF4P18848 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF4P18848 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.09■□□□□ 0.33
ATF4P18848 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF4P18848 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.09■□□□□ 0.33
ATF4P18848 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF4P18848 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF4P18848 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF4P18848 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
ATF4P18848 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATF4P18848 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.08■□□□□ 0.33
ATF4P18848 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATF4P18848 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATF4P18848 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATF4P18848 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATF4P18848 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
ATF4P18848 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.08■□□□□ 0.32
ATF4P18848 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATF4P18848 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.08■□□□□ 0.32
ATF4P18848 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATF4P18848 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATF4P18848 AC137630.3-201ENST00000607245 391 ntBASIC17.08■□□□□ 0.32
ATF4P18848 AC131212.1-201ENST00000613771 668 ntBASIC17.08■□□□□ 0.32
ATF4P18848 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ATF4P18848 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.08■□□□□ 0.32
ATF4P18848 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
ATF4P18848 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATF4P18848 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATF4P18848 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF4P18848 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.07■□□□□ 0.32
ATF4P18848 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATF4P18848 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF4P18848 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF4P18848 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.07■□□□□ 0.32
ATF4P18848 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF4P18848 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF4P18848 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF4P18848 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF4P18848 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.07■□□□□ 0.32
ATF4P18848 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF4P18848 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ATF4P18848 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ATF4P18848 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF4P18848 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ATF4P18848 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms