Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 MIR718-201ENST00000390190 70 ntBASIC19.52■□□□□ 0.72
CCL4P13236 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCL4P13236 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCL4P13236 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.52■□□□□ 0.72
CCL4P13236 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CCL4P13236 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.52■□□□□ 0.72
CCL4P13236 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.52■□□□□ 0.72
CCL4P13236 Z99916.2-201ENST00000604037 246 ntBASIC19.52■□□□□ 0.72
CCL4P13236 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCL4P13236 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
CCL4P13236 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCL4P13236 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
CCL4P13236 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCL4P13236 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CCL4P13236 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
CCL4P13236 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.51■□□□□ 0.71
CCL4P13236 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.51■□□□□ 0.71
CCL4P13236 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCL4P13236 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.51■□□□□ 0.71
CCL4P13236 AC087633.2-202ENST00000565166 1439 ntBASIC19.51■□□□□ 0.71
CCL4P13236 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CCL4P13236 AC233723.2-201ENST00000623798 2106 ntBASIC19.51■□□□□ 0.71
CCL4P13236 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.51■□□□□ 0.71
CCL4P13236 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCL4P13236 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.51■□□□□ 0.71
CCL4P13236 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CCL4P13236 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCL4P13236 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CCL4P13236 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCL4P13236 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCL4P13236 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCL4P13236 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.51■□□□□ 0.71
CCL4P13236 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.51■□□□□ 0.71
CCL4P13236 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCL4P13236 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.51■□□□□ 0.71
CCL4P13236 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCL4P13236 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCL4P13236 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCL4P13236 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCL4P13236 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.5■□□□□ 0.71
CCL4P13236 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.5■□□□□ 0.71
CCL4P13236 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CCL4P13236 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.5■□□□□ 0.71
CCL4P13236 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.5■□□□□ 0.71
CCL4P13236 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.5■□□□□ 0.71
CCL4P13236 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCL4P13236 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCL4P13236 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL4P13236 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCL4P13236 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCL4P13236 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCL4P13236 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL4P13236 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL4P13236 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL4P13236 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL4P13236 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL4P13236 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCL4P13236 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL4P13236 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCL4P13236 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.49■□□□□ 0.71
CCL4P13236 MIR4497-201ENST00000583208 89 ntBASIC19.49■□□□□ 0.71
CCL4P13236 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.49■□□□□ 0.71
CCL4P13236 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.49■□□□□ 0.71
CCL4P13236 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.49■□□□□ 0.71
CCL4P13236 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.49■□□□□ 0.71
CCL4P13236 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCL4P13236 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCL4P13236 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL4P13236 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCL4P13236 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCL4P13236 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL4P13236 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL4P13236 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL4P13236 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCL4P13236 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.48■□□□□ 0.71
CCL4P13236 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCL4P13236 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCL4P13236 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL4P13236 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.48■□□□□ 0.71
CCL4P13236 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.48■□□□□ 0.71
CCL4P13236 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCL4P13236 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCL4P13236 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL4P13236 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCL4P13236 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL4P13236 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCL4P13236 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL4P13236 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.47■□□□□ 0.71
CCL4P13236 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCL4P13236 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.47■□□□□ 0.71
CCL4P13236 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.47■□□□□ 0.71
CCL4P13236 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CCL4P13236 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.47■□□□□ 0.71
CCL4P13236 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.47■□□□□ 0.71
CCL4P13236 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
CCL4P13236 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.47■□□□□ 0.71
CCL4P13236 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL4P13236 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCL4P13236 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCL4P13236 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms