Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLUP10909 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.53■□□□□ 0.56
CLUP10909 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.53■□□□□ 0.56
CLUP10909 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.53■□□□□ 0.56
CLUP10909 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.53■□□□□ 0.56
CLUP10909 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLUP10909 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLUP10909 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
CLUP10909 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLUP10909 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.53■□□□□ 0.56
CLUP10909 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CLUP10909 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLUP10909 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLUP10909 RASA4CP-201ENST00000424092 1398 ntBASIC18.53■□□□□ 0.56
CLUP10909 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.53■□□□□ 0.56
CLUP10909 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLUP10909 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.52■□□□□ 0.56
CLUP10909 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.52■□□□□ 0.56
CLUP10909 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLUP10909 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CLUP10909 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLUP10909 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLUP10909 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CLUP10909 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CLUP10909 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLUP10909 EEF1DP3-203ENST00000566025 782 ntBASIC18.52■□□□□ 0.56
CLUP10909 AL355001.2-201ENST00000620617 1191 ntBASIC18.52■□□□□ 0.56
CLUP10909 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLUP10909 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.52■□□□□ 0.55
CLUP10909 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.52■□□□□ 0.55
CLUP10909 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
CLUP10909 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CLUP10909 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLUP10909 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.51■□□□□ 0.55
CLUP10909 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLUP10909 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLUP10909 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLUP10909 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.51■□□□□ 0.55
CLUP10909 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLUP10909 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.51■□□□□ 0.55
CLUP10909 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.51■□□□□ 0.55
CLUP10909 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLUP10909 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLUP10909 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLUP10909 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLUP10909 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.51■□□□□ 0.55
CLUP10909 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLUP10909 AL031432.3-201ENST00000607698 485 ntBASIC18.51■□□□□ 0.55
CLUP10909 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.51■□□□□ 0.55
CLUP10909 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.51■□□□□ 0.55
CLUP10909 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLUP10909 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CLUP10909 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLUP10909 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLUP10909 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLUP10909 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CLUP10909 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLUP10909 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.5■□□□□ 0.55
CLUP10909 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.5■□□□□ 0.55
CLUP10909 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLUP10909 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLUP10909 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLUP10909 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.5■□□□□ 0.55
CLUP10909 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.5■□□□□ 0.55
CLUP10909 AC091305.1-201ENST00000479476 895 ntBASIC18.5■□□□□ 0.55
CLUP10909 AC053503.5-201ENST00000601508 636 ntBASIC18.5■□□□□ 0.55
CLUP10909 AL136967.2-201ENST00000623968 743 ntBASIC18.5■□□□□ 0.55
CLUP10909 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLUP10909 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.5■□□□□ 0.55
CLUP10909 AL512408.1-201ENST00000569378 2000 ntBASIC18.5■□□□□ 0.55
CLUP10909 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLUP10909 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLUP10909 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLUP10909 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLUP10909 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.5■□□□□ 0.55
CLUP10909 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.5■□□□□ 0.55
CLUP10909 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLUP10909 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.49■□□□□ 0.55
CLUP10909 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.49■□□□□ 0.55
CLUP10909 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLUP10909 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.49■□□□□ 0.55
CLUP10909 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLUP10909 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.49■□□□□ 0.55
CLUP10909 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.49■□□□□ 0.55
CLUP10909 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLUP10909 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLUP10909 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLUP10909 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.49■□□□□ 0.55
CLUP10909 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.49■□□□□ 0.55
CLUP10909 AC012414.1-201ENST00000556676 535 ntBASIC18.49■□□□□ 0.55
CLUP10909 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.49■□□□□ 0.55
CLUP10909 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLUP10909 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLUP10909 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.49■□□□□ 0.55
CLUP10909 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLUP10909 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.49■□□□□ 0.55
CLUP10909 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.49■□□□□ 0.55
CLUP10909 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CLUP10909 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CLUP10909 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms