Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 YGR038C-AYGR038C-A 1323 nt1.11□□□□□ -2.23
TY2B-LR1P0C2J3 YGR161C-CYGR161C-C 1323 nt1.11□□□□□ -2.23
TY2B-LR1P0C2J3 YJR026WYJR026W 1323 nt1.11□□□□□ -2.23
TY2B-LR1P0C2J3 YJR028WYJR028W 1323 nt1.11□□□□□ -2.23
TY2B-LR1P0C2J3 YAR010CYAR010C 1323 nt1.11□□□□□ -2.23
TY2B-LR1P0C2J3 YLR157C-AYLR157C-A 1323 nt1.11□□□□□ -2.23
TY2B-LR1P0C2J3 YLR227W-AYLR227W-A 1323 nt1.11□□□□□ -2.23
TY2B-LR1P0C2J3 YLR256W-AYLR256W-A 1323 nt1.11□□□□□ -2.23
TY2B-LR1P0C2J3 YML040WYML040W 1323 nt1.11□□□□□ -2.23
TY2B-LR1P0C2J3 YML045W-AYML045W-A 1323 nt1.11□□□□□ -2.23
TY2B-LR1P0C2J3 YMR051CYMR051C 1323 nt1.11□□□□□ -2.23
TY2B-LR1P0C2J3 YNL054W-AYNL054W-A 1323 nt1.11□□□□□ -2.23
TY2B-LR1P0C2J3 YNL284C-AYNL284C-A 1323 nt1.11□□□□□ -2.23
TY2B-LR1P0C2J3 YOL103W-AYOL103W-A 1323 nt1.11□□□□□ -2.23
TY2B-LR1P0C2J3 YBR012W-AYBR012W-A 1323 nt1.11□□□□□ -2.23
TY2B-LR1P0C2J3 YOR142W-AYOR142W-A 1323 nt1.11□□□□□ -2.23
TY2B-LR1P0C2J3 YPL257W-AYPL257W-A 1323 nt1.11□□□□□ -2.23
TY2B-LR1P0C2J3 YPR137C-AYPR137C-A 1323 nt1.11□□□□□ -2.23
TY2B-LR1P0C2J3 YPR158C-CYPR158C-C 1323 nt1.11□□□□□ -2.23
TY2B-LR1P0C2J3 YPR158W-AYPR158W-A 1323 nt1.11□□□□□ -2.23
TY2B-LR1P0C2J3 RPC11YDR045C 333 nt1.11□□□□□ -2.23
TY2B-LR1P0C2J3 PRM9YAR031W 897 nt1.11□□□□□ -2.23
TY2B-LR1P0C2J3 YML084WYML084W 309 nt1.11□□□□□ -2.23
TY2B-LR1P0C2J3 PAU3YCR104W 375 nt1.1□□□□□ -2.23
TY2B-LR1P0C2J3 EBP2YKL172W 1284 nt1.1□□□□□ -2.23
TY2B-LR1P0C2J3 SET3YKR029C 2256 nt1.09□□□□□ -2.23
TY2B-LR1P0C2J3 RUD3YOR216C 1455 nt1.09□□□□□ -2.24
TY2B-LR1P0C2J3 APL1YJR005W 2103 nt1.09□□□□□ -2.24
TY2B-LR1P0C2J3 YGL262WYGL262W 528 nt1.08□□□□□ -2.24
TY2B-LR1P0C2J3 YER066C-AYER066C-A 501 nt1.08□□□□□ -2.24
TY2B-LR1P0C2J3 MTG1YMR097C 1104 nt1.08□□□□□ -2.24
TY2B-LR1P0C2J3 RPL16AYIL133C 600 nt1.07□□□□□ -2.24
TY2B-LR1P0C2J3 MNL2YLR057W 2550 nt1.07□□□□□ -2.24
TY2B-LR1P0C2J3 YAL034C-BYAL034C-B 354 nt1.06□□□□□ -2.24
TY2B-LR1P0C2J3 RIO2YNL207W 1278 nt1.06□□□□□ -2.24
TY2B-LR1P0C2J3 SPR3YGR059W 1539 nt1.06□□□□□ -2.24
TY2B-LR1P0C2J3 YLR108CYLR108C 1458 nt1.06□□□□□ -2.24
TY2B-LR1P0C2J3 TFB1YDR311W 1929 nt1.05□□□□□ -2.24
TY2B-LR1P0C2J3 ASG1YIL130W 2895 nt1.05□□□□□ -2.24
TY2B-LR1P0C2J3 APL3YBL037W 3078 nt1.04□□□□□ -2.24
TY2B-LR1P0C2J3 LEU3YLR451W 2661 nt1.04□□□□□ -2.24
TY2B-LR1P0C2J3 YBR138CYBR138C 1575 nt1.04□□□□□ -2.24
TY2B-LR1P0C2J3 NOP19YGR251W 591 nt1.03□□□□□ -2.24
TY2B-LR1P0C2J3 PET130YJL023C 1044 nt1.03□□□□□ -2.24
TY2B-LR1P0C2J3 HUB1YNR032C-A 222 nt1.03□□□□□ -2.24
TY2B-LR1P0C2J3 YCS4YLR272C 3531 nt1.03□□□□□ -2.24
TY2B-LR1P0C2J3 YNL054W-BYNL054W-B 5250 nt1.03□□□□□ -2.24
TY2B-LR1P0C2J3 KAP120YPL125W 3099 nt1.03□□□□□ -2.24
TY2B-LR1P0C2J3 RPS17BYDR447C 411 nt1.03□□□□□ -2.24
TY2B-LR1P0C2J3 RSR1YGR152C 819 nt1.03□□□□□ -2.24
TY2B-LR1P0C2J3 YJL133C-AYJL133C-A 225 nt1.03□□□□□ -2.24
TY2B-LR1P0C2J3 RED1YLR263W 2484 nt1.02□□□□□ -2.25
TY2B-LR1P0C2J3 MAD3YJL013C 1548 nt1.02□□□□□ -2.25
TY2B-LR1P0C2J3 YGR149WYGR149W 1299 nt1.02□□□□□ -2.25
TY2B-LR1P0C2J3 CLC1YGR167W 702 nt1.02□□□□□ -2.25
TY2B-LR1P0C2J3 YKL156C-AYKL156C-A 117 nt1.01□□□□□ -2.25
TY2B-LR1P0C2J3 TFA2YKR062W 987 nt1.01□□□□□ -2.25
TY2B-LR1P0C2J3 AI1Q0050 2505 nt1.01□□□□□ -2.25
TY2B-LR1P0C2J3 TIM11YDR322C-A 291 nt1.01□□□□□ -2.25
TY2B-LR1P0C2J3 SEC4YFL005W 648 nt1.01□□□□□ -2.25
TY2B-LR1P0C2J3 YJL202CYJL202C 348 nt1.01□□□□□ -2.25
TY2B-LR1P0C2J3 YKL069WYKL069W 543 nt1.01□□□□□ -2.25
TY2B-LR1P0C2J3 SMD3YLR147C 306 nt1.01□□□□□ -2.25
TY2B-LR1P0C2J3 YOR263CYOR263C 408 nt1.01□□□□□ -2.25
TY2B-LR1P0C2J3 SPC29YPL124W 762 nt1.01□□□□□ -2.25
TY2B-LR1P0C2J3 YIP3YNL044W 531 nt1□□□□□ -2.25
TY2B-LR1P0C2J3 SSP1YHR184W 1716 nt0.99□□□□□ -2.25
TY2B-LR1P0C2J3 YDR340WYDR340W 303 nt0.99□□□□□ -2.25
TY2B-LR1P0C2J3 YOR062CYOR062C 807 nt0.99□□□□□ -2.25
TY2B-LR1P0C2J3 YOR343W-BYOR343W-B 5313 nt0.99□□□□□ -2.25
TY2B-LR1P0C2J3 STN1YDR082W 1485 nt0.99□□□□□ -2.25
TY2B-LR1P0C2J3 YDR124WYDR124W 975 nt0.98□□□□□ -2.25
TY2B-LR1P0C2J3 YIL068W-AYIL068W-A 384 nt0.98□□□□□ -2.25
TY2B-LR1P0C2J3 MCR1YKL150W 909 nt0.98□□□□□ -2.25
TY2B-LR1P0C2J3 MUS81YDR386W 1899 nt0.98□□□□□ -2.25
TY2B-LR1P0C2J3 PIN4YBL051C 2007 nt0.98□□□□□ -2.25
TY2B-LR1P0C2J3 YGR109W-AYGR109W-A 873 nt0.98□□□□□ -2.25
TY2B-LR1P0C2J3 YIL082WYIL082W 873 nt0.98□□□□□ -2.25
TY2B-LR1P0C2J3 FIP1YJR093C 984 nt0.98□□□□□ -2.25
TY2B-LR1P0C2J3 DPB3YBR278W 606 nt0.98□□□□□ -2.25
TY2B-LR1P0C2J3 BSC2YDR275W 708 nt0.97□□□□□ -2.25
TY2B-LR1P0C2J3 YLR140WYLR140W 327 nt0.97□□□□□ -2.25
TY2B-LR1P0C2J3 RKR1YMR247C 4689 nt0.97□□□□□ -2.25
TY2B-LR1P0C2J3 YJR029WYJR029W 5268 nt0.97□□□□□ -2.25
TY2B-LR1P0C2J3 YNL284C-BYNL284C-B 5268 nt0.97□□□□□ -2.25
TY2B-LR1P0C2J3 YPR137C-BYPR137C-B 5268 nt0.97□□□□□ -2.25
TY2B-LR1P0C2J3 YGR290WYGR290W 444 nt0.96□□□□□ -2.26
TY2B-LR1P0C2J3 YIL058WYIL058W 285 nt0.96□□□□□ -2.26
TY2B-LR1P0C2J3 HRT3YLR097C 1035 nt0.96□□□□□ -2.26
TY2B-LR1P0C2J3 GPN3YLR243W 819 nt0.96□□□□□ -2.26
TY2B-LR1P0C2J3 TBS1YBR150C 3285 nt0.96□□□□□ -2.26
TY2B-LR1P0C2J3 CTF18YMR078C 2226 nt0.96□□□□□ -2.26
TY2B-LR1P0C2J3 USV1YPL230W 1176 nt0.96□□□□□ -2.26
TY2B-LR1P0C2J3 CAT2YML042W 2013 nt0.95□□□□□ -2.26
TY2B-LR1P0C2J3 PDS5YMR076C 3834 nt0.95□□□□□ -2.26
TY2B-LR1P0C2J3 YOR082CYOR082C 342 nt0.94□□□□□ -2.26
TY2B-LR1P0C2J3 YPR148CYPR148C 1308 nt0.94□□□□□ -2.26
TY2B-LR1P0C2J3 MAL33YBR297W 1407 nt0.94□□□□□ -2.26
TY2B-LR1P0C2J3 PML1YLR016C 615 nt0.93□□□□□ -2.26
TY2B-LR1P0C2J3 SRP1YNL189W 1629 nt0.93□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 18.1 ms