Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HLA-DQB2P05538 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DQB2P05538 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HLA-DQB2P05538 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.9■□□□□ 0.94
HLA-DQB2P05538 AC007225.1-201ENST00000566331 1836 ntBASIC20.9■□□□□ 0.94
HLA-DQB2P05538 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.9■□□□□ 0.94
HLA-DQB2P05538 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.89■□□□□ 0.94
HLA-DQB2P05538 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
HLA-DQB2P05538 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
HLA-DQB2P05538 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HLA-DQB2P05538 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
HLA-DQB2P05538 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.89■□□□□ 0.93
HLA-DQB2P05538 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-DQB2P05538 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.89■□□□□ 0.93
HLA-DQB2P05538 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.89■□□□□ 0.93
HLA-DQB2P05538 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.89■□□□□ 0.93
HLA-DQB2P05538 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.89■□□□□ 0.93
HLA-DQB2P05538 AC073111.5-205ENST00000641717 521 ntBASIC20.89■□□□□ 0.93
HLA-DQB2P05538 FP700111.2-201ENST00000619190 1892 ntBASIC20.89■□□□□ 0.93
HLA-DQB2P05538 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-DQB2P05538 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-DQB2P05538 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-DQB2P05538 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-DQB2P05538 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-DQB2P05538 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-DQB2P05538 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQB2P05538 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQB2P05538 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQB2P05538 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.88■□□□□ 0.93
HLA-DQB2P05538 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQB2P05538 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQB2P05538 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQB2P05538 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQB2P05538 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQB2P05538 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.88■□□□□ 0.93
HLA-DQB2P05538 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.88■□□□□ 0.93
HLA-DQB2P05538 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HLA-DQB2P05538 AC231657.2-201ENST00000624556 255 ntBASIC20.88■□□□□ 0.93
HLA-DQB2P05538 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQB2P05538 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
HLA-DQB2P05538 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQB2P05538 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQB2P05538 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
HLA-DQB2P05538 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.88■□□□□ 0.93
HLA-DQB2P05538 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.88■□□□□ 0.93
HLA-DQB2P05538 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQB2P05538 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
HLA-DQB2P05538 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQB2P05538 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DQB2P05538 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.87■□□□□ 0.93
HLA-DQB2P05538 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
HLA-DQB2P05538 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DQB2P05538 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
HLA-DQB2P05538 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DQB2P05538 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DQB2P05538 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DQB2P05538 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
HLA-DQB2P05538 AC007322.1-201ENST00000426983 750 ntBASIC20.87■□□□□ 0.93
HLA-DQB2P05538 CYP2T1P-201ENST00000432607 1285 ntBASIC20.87■□□□□ 0.93
HLA-DQB2P05538 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.87■□□□□ 0.93
HLA-DQB2P05538 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.87■□□□□ 0.93
HLA-DQB2P05538 FAM21FP-204ENST00000608637 956 ntBASIC20.87■□□□□ 0.93
HLA-DQB2P05538 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.87■□□□□ 0.93
HLA-DQB2P05538 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
HLA-DQB2P05538 AL157384.1-201ENST00000445995 2473 ntBASIC20.87■□□□□ 0.93
HLA-DQB2P05538 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DQB2P05538 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DQB2P05538 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.87■□□□□ 0.93
HLA-DQB2P05538 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
HLA-DQB2P05538 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.86■□□□□ 0.93
HLA-DQB2P05538 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
HLA-DQB2P05538 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
HLA-DQB2P05538 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
HLA-DQB2P05538 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
HLA-DQB2P05538 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.86■□□□□ 0.93
HLA-DQB2P05538 CDCA4P2-201ENST00000441182 718 ntBASIC20.86■□□□□ 0.93
HLA-DQB2P05538 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.86■□□□□ 0.93
HLA-DQB2P05538 AL162412.1-201ENST00000567129 965 ntBASIC20.86■□□□□ 0.93
HLA-DQB2P05538 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
HLA-DQB2P05538 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.86■□□□□ 0.93
HLA-DQB2P05538 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.86■□□□□ 0.93
HLA-DQB2P05538 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DQB2P05538 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
HLA-DQB2P05538 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DQB2P05538 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DQB2P05538 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.85■□□□□ 0.93
HLA-DQB2P05538 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DQB2P05538 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DQB2P05538 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DQB2P05538 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DQB2P05538 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DQB2P05538 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.85■□□□□ 0.93
HLA-DQB2P05538 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.85■□□□□ 0.93
HLA-DQB2P05538 AL121603.2-201ENST00000557373 2117 ntBASIC20.85■□□□□ 0.93
HLA-DQB2P05538 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DQB2P05538 AC092666.2-201ENST00000613287 246 ntBASIC20.85■□□□□ 0.93
HLA-DQB2P05538 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.85■□□□□ 0.93
HLA-DQB2P05538 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DQB2P05538 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DQB2P05538 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms