Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.35■□□□□ 0.69
CLPTM1O96005 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLPTM1O96005 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLPTM1O96005 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.35■□□□□ 0.69
CLPTM1O96005 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPTM1O96005 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.34■□□□□ 0.69
CLPTM1O96005 FP325331.1-202ENST00000623531 1380 ntBASIC19.34■□□□□ 0.69
CLPTM1O96005 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
CLPTM1O96005 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPTM1O96005 PLK5-205ENST00000642079 1969 ntBASIC19.34■□□□□ 0.69
CLPTM1O96005 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPTM1O96005 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLPTM1O96005 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPTM1O96005 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPTM1O96005 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPTM1O96005 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPTM1O96005 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.34■□□□□ 0.69
CLPTM1O96005 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLPTM1O96005 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.34■□□□□ 0.69
CLPTM1O96005 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CLPTM1O96005 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPTM1O96005 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLPTM1O96005 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLPTM1O96005 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLPTM1O96005 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.33■□□□□ 0.69
CLPTM1O96005 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CLPTM1O96005 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLPTM1O96005 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.33■□□□□ 0.69
CLPTM1O96005 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CLPTM1O96005 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLPTM1O96005 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.33■□□□□ 0.68
CLPTM1O96005 SRD5A1P1-201ENST00000442297 786 ntBASIC19.33■□□□□ 0.68
CLPTM1O96005 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.33■□□□□ 0.68
CLPTM1O96005 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLPTM1O96005 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.33■□□□□ 0.68
CLPTM1O96005 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.33■□□□□ 0.68
CLPTM1O96005 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CLPTM1O96005 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.33■□□□□ 0.68
CLPTM1O96005 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.33■□□□□ 0.68
CLPTM1O96005 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.33■□□□□ 0.68
CLPTM1O96005 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLPTM1O96005 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1O96005 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
CLPTM1O96005 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1O96005 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1O96005 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.32■□□□□ 0.68
CLPTM1O96005 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1O96005 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CLPTM1O96005 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.32■□□□□ 0.68
CLPTM1O96005 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CLPTM1O96005 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1O96005 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1O96005 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1O96005 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.32■□□□□ 0.68
CLPTM1O96005 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.32■□□□□ 0.68
CLPTM1O96005 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1O96005 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.32■□□□□ 0.68
CLPTM1O96005 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1O96005 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLPTM1O96005 AL162377.1-201ENST00000618844 1793 ntBASIC19.32■□□□□ 0.68
CLPTM1O96005 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPTM1O96005 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPTM1O96005 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.31■□□□□ 0.68
CLPTM1O96005 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPTM1O96005 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CLPTM1O96005 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.31■□□□□ 0.68
CLPTM1O96005 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPTM1O96005 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPTM1O96005 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPTM1O96005 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.31■□□□□ 0.68
CLPTM1O96005 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLPTM1O96005 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPTM1O96005 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLPTM1O96005 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLPTM1O96005 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CLPTM1O96005 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CLPTM1O96005 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CLPTM1O96005 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CLPTM1O96005 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPTM1O96005 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPTM1O96005 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CLPTM1O96005 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPTM1O96005 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
CLPTM1O96005 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.3■□□□□ 0.68
CLPTM1O96005 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPTM1O96005 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPTM1O96005 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPTM1O96005 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.3■□□□□ 0.68
CLPTM1O96005 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPTM1O96005 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPTM1O96005 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPTM1O96005 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPTM1O96005 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPTM1O96005 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPTM1O96005 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLPTM1O96005 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLPTM1O96005 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLPTM1O96005 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CLPTM1O96005 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLPTM1O96005 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms