Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.65■□□□□ 0.9
VAPBO95292 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
VAPBO95292 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VAPBO95292 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.65■□□□□ 0.9
VAPBO95292 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VAPBO95292 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.65■□□□□ 0.9
VAPBO95292 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
VAPBO95292 AC027702.1-201ENST00000563810 1770 ntBASIC20.65■□□□□ 0.9
VAPBO95292 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.65■□□□□ 0.9
VAPBO95292 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VAPBO95292 KRT19P1-201ENST00000405746 1186 ntBASIC20.65■□□□□ 0.9
VAPBO95292 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.65■□□□□ 0.9
VAPBO95292 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.65■□□□□ 0.9
VAPBO95292 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.65■□□□□ 0.9
VAPBO95292 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VAPBO95292 AL121603.2-201ENST00000557373 2117 ntBASIC20.65■□□□□ 0.9
VAPBO95292 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VAPBO95292 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
VAPBO95292 GABARAPL3-202ENST00000624044 1851 ntBASIC20.64■□□□□ 0.9
VAPBO95292 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.64■□□□□ 0.9
VAPBO95292 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
VAPBO95292 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VAPBO95292 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
VAPBO95292 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
VAPBO95292 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
VAPBO95292 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
VAPBO95292 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
VAPBO95292 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.64■□□□□ 0.89
VAPBO95292 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VAPBO95292 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
VAPBO95292 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VAPBO95292 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.64■□□□□ 0.89
VAPBO95292 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VAPBO95292 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.64■□□□□ 0.89
VAPBO95292 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.64■□□□□ 0.89
VAPBO95292 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.64■□□□□ 0.89
VAPBO95292 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
VAPBO95292 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.64■□□□□ 0.89
VAPBO95292 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
VAPBO95292 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.64■□□□□ 0.89
VAPBO95292 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
VAPBO95292 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VAPBO95292 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VAPBO95292 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VAPBO95292 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VAPBO95292 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VAPBO95292 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
VAPBO95292 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VAPBO95292 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VAPBO95292 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.63■□□□□ 0.89
VAPBO95292 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
VAPBO95292 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
VAPBO95292 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.63■□□□□ 0.89
VAPBO95292 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VAPBO95292 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
VAPBO95292 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
VAPBO95292 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
VAPBO95292 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VAPBO95292 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
VAPBO95292 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VAPBO95292 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VAPBO95292 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VAPBO95292 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VAPBO95292 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
VAPBO95292 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VAPBO95292 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VAPBO95292 AC097381.1-201ENST00000429019 1296 ntBASIC20.62■□□□□ 0.89
VAPBO95292 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.62■□□□□ 0.89
VAPBO95292 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.62■□□□□ 0.89
VAPBO95292 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VAPBO95292 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VAPBO95292 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
VAPBO95292 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
VAPBO95292 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VAPBO95292 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.62■□□□□ 0.89
VAPBO95292 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VAPBO95292 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
VAPBO95292 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
VAPBO95292 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.61■□□□□ 0.89
VAPBO95292 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.61■□□□□ 0.89
VAPBO95292 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
VAPBO95292 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.61■□□□□ 0.89
VAPBO95292 NTF6G-201ENST00000591094 616 ntBASIC20.61■□□□□ 0.89
VAPBO95292 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.61■□□□□ 0.89
VAPBO95292 AC116050.2-201ENST00000612102 1779 ntBASIC20.61■□□□□ 0.89
VAPBO95292 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
VAPBO95292 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VAPBO95292 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.61■□□□□ 0.89
VAPBO95292 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.61■□□□□ 0.89
VAPBO95292 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VAPBO95292 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VAPBO95292 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.6■□□□□ 0.89
VAPBO95292 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VAPBO95292 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.6■□□□□ 0.89
VAPBO95292 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VAPBO95292 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.6■□□□□ 0.89
VAPBO95292 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.6■□□□□ 0.89
VAPBO95292 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
VAPBO95292 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
VAPBO95292 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms