Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH8O95206 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PCDH8O95206 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDH8O95206 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.58■□□□□ 0.89
PCDH8O95206 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH8O95206 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH8O95206 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH8O95206 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH8O95206 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH8O95206 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH8O95206 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH8O95206 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH8O95206 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH8O95206 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH8O95206 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
PCDH8O95206 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH8O95206 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH8O95206 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH8O95206 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.57■□□□□ 0.88
PCDH8O95206 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH8O95206 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH8O95206 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH8O95206 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.57■□□□□ 0.88
PCDH8O95206 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDH8O95206 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDH8O95206 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH8O95206 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDH8O95206 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDH8O95206 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH8O95206 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PCDH8O95206 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH8O95206 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDH8O95206 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH8O95206 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH8O95206 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH8O95206 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH8O95206 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH8O95206 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PCDH8O95206 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH8O95206 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH8O95206 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH8O95206 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDH8O95206 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
PCDH8O95206 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDH8O95206 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDH8O95206 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH8O95206 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH8O95206 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDH8O95206 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH8O95206 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH8O95206 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PCDH8O95206 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH8O95206 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH8O95206 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
PCDH8O95206 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH8O95206 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH8O95206 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH8O95206 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDH8O95206 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH8O95206 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH8O95206 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH8O95206 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH8O95206 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH8O95206 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDH8O95206 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH8O95206 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PCDH8O95206 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDH8O95206 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH8O95206 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PCDH8O95206 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH8O95206 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDH8O95206 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDH8O95206 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH8O95206 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH8O95206 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDH8O95206 Z98882.1-201ENST00000622160 2253 ntBASIC20.55■□□□□ 0.88
PCDH8O95206 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.54■□□□□ 0.88
PCDH8O95206 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH8O95206 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH8O95206 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH8O95206 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDH8O95206 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PCDH8O95206 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH8O95206 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PCDH8O95206 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH8O95206 KRT18P29-201ENST00000397031 1267 ntBASIC20.54■□□□□ 0.88
PCDH8O95206 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.54■□□□□ 0.88
PCDH8O95206 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.54■□□□□ 0.88
PCDH8O95206 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.54■□□□□ 0.88
PCDH8O95206 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH8O95206 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.54■□□□□ 0.88
PCDH8O95206 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PCDH8O95206 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDH8O95206 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH8O95206 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH8O95206 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH8O95206 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH8O95206 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH8O95206 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDH8O95206 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms