Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBL3O95164 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBL3O95164 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBL3O95164 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBL3O95164 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.4■□□□□ 0.54
UBL3O95164 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.4■□□□□ 0.54
UBL3O95164 POU5F1P4-201ENST00000413175 1085 ntBASIC18.4■□□□□ 0.54
UBL3O95164 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.4■□□□□ 0.54
UBL3O95164 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.4■□□□□ 0.54
UBL3O95164 AP001160.3-201ENST00000601484 763 ntBASIC18.4■□□□□ 0.54
UBL3O95164 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBL3O95164 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.4■□□□□ 0.54
UBL3O95164 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBL3O95164 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
UBL3O95164 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBL3O95164 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBL3O95164 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.4■□□□□ 0.54
UBL3O95164 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
UBL3O95164 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
UBL3O95164 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
UBL3O95164 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
UBL3O95164 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
UBL3O95164 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
UBL3O95164 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
UBL3O95164 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
UBL3O95164 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
UBL3O95164 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
UBL3O95164 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBL3O95164 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBL3O95164 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
UBL3O95164 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBL3O95164 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBL3O95164 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBL3O95164 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBL3O95164 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBL3O95164 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
UBL3O95164 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBL3O95164 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBL3O95164 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBL3O95164 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.39■□□□□ 0.53
UBL3O95164 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBL3O95164 AL049796.1-201ENST00000565336 1766 ntBASIC18.39■□□□□ 0.53
UBL3O95164 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.39■□□□□ 0.53
UBL3O95164 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBL3O95164 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
UBL3O95164 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBL3O95164 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.39■□□□□ 0.53
UBL3O95164 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.39■□□□□ 0.53
UBL3O95164 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBL3O95164 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.38■□□□□ 0.53
UBL3O95164 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.38■□□□□ 0.53
UBL3O95164 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.38■□□□□ 0.53
UBL3O95164 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.38■□□□□ 0.53
UBL3O95164 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
UBL3O95164 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.38■□□□□ 0.53
UBL3O95164 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBL3O95164 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.38■□□□□ 0.53
UBL3O95164 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.38■□□□□ 0.53
UBL3O95164 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
UBL3O95164 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.38■□□□□ 0.53
UBL3O95164 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBL3O95164 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.38■□□□□ 0.53
UBL3O95164 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.38■□□□□ 0.53
UBL3O95164 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBL3O95164 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBL3O95164 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.38■□□□□ 0.53
UBL3O95164 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
UBL3O95164 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
UBL3O95164 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.37■□□□□ 0.53
UBL3O95164 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBL3O95164 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.37■□□□□ 0.53
UBL3O95164 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBL3O95164 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBL3O95164 KRT18P20-201ENST00000548986 1279 ntBASIC18.37■□□□□ 0.53
UBL3O95164 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.37■□□□□ 0.53
UBL3O95164 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.37■□□□□ 0.53
UBL3O95164 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBL3O95164 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBL3O95164 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.37■□□□□ 0.53
UBL3O95164 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
UBL3O95164 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBL3O95164 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBL3O95164 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBL3O95164 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBL3O95164 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBL3O95164 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBL3O95164 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBL3O95164 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBL3O95164 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
UBL3O95164 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.36■□□□□ 0.53
UBL3O95164 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.36■□□□□ 0.53
UBL3O95164 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBL3O95164 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBL3O95164 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBL3O95164 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBL3O95164 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBL3O95164 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBL3O95164 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBL3O95164 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
UBL3O95164 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms