Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SUPT3HO75486 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.31■□□□□ 0.84
SUPT3HO75486 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SUPT3HO75486 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SUPT3HO75486 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SUPT3HO75486 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SUPT3HO75486 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.31■□□□□ 0.84
SUPT3HO75486 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SUPT3HO75486 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SUPT3HO75486 LINC02228-203ENST00000641970 1355 ntBASIC20.31■□□□□ 0.84
SUPT3HO75486 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.31■□□□□ 0.84
SUPT3HO75486 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SUPT3HO75486 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SUPT3HO75486 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SUPT3HO75486 AC007952.6-201ENST00000573168 2673 ntBASIC20.3■□□□□ 0.84
SUPT3HO75486 AC003957.1-201ENST00000625108 2673 ntBASIC20.3■□□□□ 0.84
SUPT3HO75486 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SUPT3HO75486 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SUPT3HO75486 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
SUPT3HO75486 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
SUPT3HO75486 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SUPT3HO75486 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SUPT3HO75486 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.3■□□□□ 0.84
SUPT3HO75486 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.3■□□□□ 0.84
SUPT3HO75486 AC138907.5-202ENST00000569484 235 ntBASIC20.3■□□□□ 0.84
SUPT3HO75486 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SUPT3HO75486 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SUPT3HO75486 AC073314.1-201ENST00000568729 2216 ntBASIC20.3■□□□□ 0.84
SUPT3HO75486 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.3■□□□□ 0.84
SUPT3HO75486 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SUPT3HO75486 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SUPT3HO75486 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.29■□□□□ 0.84
SUPT3HO75486 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SUPT3HO75486 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SUPT3HO75486 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.29■□□□□ 0.84
SUPT3HO75486 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SUPT3HO75486 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SUPT3HO75486 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SUPT3HO75486 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.29■□□□□ 0.84
SUPT3HO75486 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SUPT3HO75486 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
SUPT3HO75486 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SUPT3HO75486 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.29■□□□□ 0.84
SUPT3HO75486 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SUPT3HO75486 AC007225.1-201ENST00000566331 1836 ntBASIC20.29■□□□□ 0.84
SUPT3HO75486 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SUPT3HO75486 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SUPT3HO75486 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SUPT3HO75486 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.29■□□□□ 0.84
SUPT3HO75486 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SUPT3HO75486 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SUPT3HO75486 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SUPT3HO75486 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SUPT3HO75486 AP005212.1-201ENST00000581547 1997 ntBASIC20.28■□□□□ 0.84
SUPT3HO75486 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.28■□□□□ 0.84
SUPT3HO75486 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SUPT3HO75486 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SUPT3HO75486 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SUPT3HO75486 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SUPT3HO75486 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.28■□□□□ 0.84
SUPT3HO75486 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.28■□□□□ 0.84
SUPT3HO75486 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SUPT3HO75486 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.28■□□□□ 0.84
SUPT3HO75486 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
SUPT3HO75486 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SUPT3HO75486 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
SUPT3HO75486 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SUPT3HO75486 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SUPT3HO75486 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.27■□□□□ 0.84
SUPT3HO75486 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.27■□□□□ 0.84
SUPT3HO75486 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SUPT3HO75486 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.27■□□□□ 0.84
SUPT3HO75486 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SUPT3HO75486 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SUPT3HO75486 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SUPT3HO75486 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SUPT3HO75486 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SUPT3HO75486 FP700111.2-201ENST00000619190 1892 ntBASIC20.27■□□□□ 0.84
SUPT3HO75486 GABARAPL3-202ENST00000624044 1851 ntBASIC20.27■□□□□ 0.84
SUPT3HO75486 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SUPT3HO75486 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SUPT3HO75486 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.27■□□□□ 0.84
SUPT3HO75486 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.27■□□□□ 0.84
SUPT3HO75486 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.27■□□□□ 0.84
SUPT3HO75486 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.27■□□□□ 0.84
SUPT3HO75486 AC120498.10-201ENST00000621827 505 ntBASIC20.27■□□□□ 0.84
SUPT3HO75486 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SUPT3HO75486 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.27■□□□□ 0.84
SUPT3HO75486 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SUPT3HO75486 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SUPT3HO75486 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
SUPT3HO75486 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SUPT3HO75486 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
SUPT3HO75486 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SUPT3HO75486 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SUPT3HO75486 AC011484.1-201ENST00000377652 1995 ntBASIC20.26■□□□□ 0.83
SUPT3HO75486 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SUPT3HO75486 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SUPT3HO75486 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SUPT3HO75486 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms