Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
CTNND1O60716 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.16■■□□□ 1.46
CTNND1O60716 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CTNND1O60716 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
CTNND1O60716 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC24.15■■□□□ 1.46
CTNND1O60716 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.15■■□□□ 1.46
CTNND1O60716 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CTNND1O60716 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CTNND1O60716 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
CTNND1O60716 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC24.15■■□□□ 1.46
CTNND1O60716 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
CTNND1O60716 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
CTNND1O60716 Z99916.2-201ENST00000604037 246 ntBASIC24.15■■□□□ 1.46
CTNND1O60716 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC24.15■■□□□ 1.46
CTNND1O60716 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC24.15■■□□□ 1.46
CTNND1O60716 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CTNND1O60716 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CTNND1O60716 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CTNND1O60716 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC24.14■■□□□ 1.45
CTNND1O60716 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC24.14■■□□□ 1.45
CTNND1O60716 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
CTNND1O60716 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
CTNND1O60716 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC24.14■■□□□ 1.45
CTNND1O60716 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
CTNND1O60716 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
CTNND1O60716 MIR4497-201ENST00000583208 89 ntBASIC24.14■■□□□ 1.45
CTNND1O60716 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC24.14■■□□□ 1.45
CTNND1O60716 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.14■■□□□ 1.45
CTNND1O60716 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
CTNND1O60716 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CTNND1O60716 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CTNND1O60716 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CTNND1O60716 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CTNND1O60716 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC24.13■■□□□ 1.45
CTNND1O60716 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
CTNND1O60716 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC24.13■■□□□ 1.45
CTNND1O60716 MFF-203ENST00000349901 1716 ntTSL 2 BASIC24.13■■□□□ 1.45
CTNND1O60716 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CTNND1O60716 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CTNND1O60716 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
CTNND1O60716 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CTNND1O60716 GOLGA2P6-201ENST00000340929 2049 ntBASIC24.12■■□□□ 1.45
CTNND1O60716 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CTNND1O60716 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CTNND1O60716 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CTNND1O60716 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CTNND1O60716 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC24.12■■□□□ 1.45
CTNND1O60716 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CTNND1O60716 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CTNND1O60716 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC24.12■■□□□ 1.45
CTNND1O60716 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CTNND1O60716 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CTNND1O60716 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
CTNND1O60716 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CTNND1O60716 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
CTNND1O60716 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CTNND1O60716 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC24.11■■□□□ 1.45
CTNND1O60716 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CTNND1O60716 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
CTNND1O60716 ME2-206ENST00000638410 2289 ntTSL 5 BASIC24.11■■□□□ 1.45
CTNND1O60716 ME2-210ENST00000639255 2262 ntTSL 5 BASIC24.11■■□□□ 1.45
CTNND1O60716 PGM5P4-201ENST00000421970 445 ntBASIC24.11■■□□□ 1.45
CTNND1O60716 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CTNND1O60716 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CTNND1O60716 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC24.11■■□□□ 1.45
CTNND1O60716 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC24.11■■□□□ 1.45
CTNND1O60716 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC24.11■■□□□ 1.45
CTNND1O60716 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC24.11■■□□□ 1.45
CTNND1O60716 AC079834.2-201ENST00000609776 1949 ntBASIC24.11■■□□□ 1.45
CTNND1O60716 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CTNND1O60716 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CTNND1O60716 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
CTNND1O60716 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CTNND1O60716 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC24.1■■□□□ 1.45
CTNND1O60716 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC24.1■■□□□ 1.45
CTNND1O60716 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CTNND1O60716 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC24.1■■□□□ 1.45
CTNND1O60716 ISG20-202ENST00000379224 540 ntTSL 3 BASIC24.1■■□□□ 1.45
CTNND1O60716 GGT1-206ENST00000404223 952 ntTSL 2 BASIC24.1■■□□□ 1.45
CTNND1O60716 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC24.1■■□□□ 1.45
CTNND1O60716 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CTNND1O60716 BRWD1-AS2-201ENST00000603064 1028 ntBASIC24.1■■□□□ 1.45
CTNND1O60716 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC24.1■■□□□ 1.45
CTNND1O60716 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CTNND1O60716 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CTNND1O60716 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
CTNND1O60716 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CTNND1O60716 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
CTNND1O60716 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CTNND1O60716 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
CTNND1O60716 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CTNND1O60716 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CTNND1O60716 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC24.09■■□□□ 1.45
CTNND1O60716 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CTNND1O60716 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CTNND1O60716 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CTNND1O60716 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CTNND1O60716 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CTNND1O60716 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
CTNND1O60716 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms