Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LCMT2O60294 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LCMT2O60294 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.7■□□□□ 0.74
LCMT2O60294 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LCMT2O60294 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LCMT2O60294 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.7■□□□□ 0.74
LCMT2O60294 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LCMT2O60294 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LCMT2O60294 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LCMT2O60294 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
LCMT2O60294 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LCMT2O60294 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LCMT2O60294 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LCMT2O60294 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LCMT2O60294 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.69■□□□□ 0.74
LCMT2O60294 CYP2T1P-201ENST00000432607 1285 ntBASIC19.69■□□□□ 0.74
LCMT2O60294 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.69■□□□□ 0.74
LCMT2O60294 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.69■□□□□ 0.74
LCMT2O60294 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LCMT2O60294 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.69■□□□□ 0.74
LCMT2O60294 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LCMT2O60294 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.69■□□□□ 0.74
LCMT2O60294 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.69■□□□□ 0.74
LCMT2O60294 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LCMT2O60294 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.69■□□□□ 0.74
LCMT2O60294 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
LCMT2O60294 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LCMT2O60294 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LCMT2O60294 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LCMT2O60294 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LCMT2O60294 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LCMT2O60294 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
LCMT2O60294 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LCMT2O60294 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LCMT2O60294 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LCMT2O60294 MIR663A-201ENST00000385250 93 ntBASIC19.68■□□□□ 0.74
LCMT2O60294 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LCMT2O60294 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
LCMT2O60294 RARRES2P4-201ENST00000514074 484 ntBASIC19.68■□□□□ 0.74
LCMT2O60294 AC090192.1-201ENST00000517740 490 ntBASIC19.68■□□□□ 0.74
LCMT2O60294 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.68■□□□□ 0.74
LCMT2O60294 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.68■□□□□ 0.74
LCMT2O60294 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.68■□□□□ 0.74
LCMT2O60294 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
LCMT2O60294 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.68■□□□□ 0.74
LCMT2O60294 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.68■□□□□ 0.74
LCMT2O60294 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.68■□□□□ 0.74
LCMT2O60294 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LCMT2O60294 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LCMT2O60294 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LCMT2O60294 AC027702.1-201ENST00000563810 1770 ntBASIC19.67■□□□□ 0.74
LCMT2O60294 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LCMT2O60294 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LCMT2O60294 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LCMT2O60294 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LCMT2O60294 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LCMT2O60294 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LCMT2O60294 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LCMT2O60294 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.67■□□□□ 0.74
LCMT2O60294 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LCMT2O60294 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.67■□□□□ 0.74
LCMT2O60294 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LCMT2O60294 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LCMT2O60294 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.67■□□□□ 0.74
LCMT2O60294 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.67■□□□□ 0.74
LCMT2O60294 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
LCMT2O60294 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LCMT2O60294 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LCMT2O60294 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
LCMT2O60294 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LCMT2O60294 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LCMT2O60294 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LCMT2O60294 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.66■□□□□ 0.74
LCMT2O60294 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LCMT2O60294 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.66■□□□□ 0.74
LCMT2O60294 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.66■□□□□ 0.74
LCMT2O60294 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LCMT2O60294 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.66■□□□□ 0.74
LCMT2O60294 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.66■□□□□ 0.74
LCMT2O60294 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LCMT2O60294 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LCMT2O60294 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
LCMT2O60294 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCMT2O60294 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCMT2O60294 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LCMT2O60294 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.65■□□□□ 0.74
LCMT2O60294 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCMT2O60294 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCMT2O60294 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCMT2O60294 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
LCMT2O60294 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCMT2O60294 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
LCMT2O60294 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCMT2O60294 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LCMT2O60294 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCMT2O60294 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCMT2O60294 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCMT2O60294 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.65■□□□□ 0.74
LCMT2O60294 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LCMT2O60294 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms