Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.45■□□□□ 0.7
URB1O60287 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.45■□□□□ 0.7
URB1O60287 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
URB1O60287 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
URB1O60287 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
URB1O60287 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
URB1O60287 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.45■□□□□ 0.7
URB1O60287 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.45■□□□□ 0.7
URB1O60287 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
URB1O60287 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.45■□□□□ 0.7
URB1O60287 NTF6B-201ENST00000591913 560 ntBASIC19.45■□□□□ 0.7
URB1O60287 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
URB1O60287 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
URB1O60287 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
URB1O60287 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
URB1O60287 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
URB1O60287 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
URB1O60287 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
URB1O60287 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
URB1O60287 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.44■□□□□ 0.7
URB1O60287 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.44■□□□□ 0.7
URB1O60287 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
URB1O60287 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
URB1O60287 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
URB1O60287 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
URB1O60287 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
URB1O60287 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.44■□□□□ 0.7
URB1O60287 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.44■□□□□ 0.7
URB1O60287 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.44■□□□□ 0.7
URB1O60287 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
URB1O60287 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.44■□□□□ 0.7
URB1O60287 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
URB1O60287 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
URB1O60287 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
URB1O60287 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
URB1O60287 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
URB1O60287 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
URB1O60287 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
URB1O60287 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.43■□□□□ 0.7
URB1O60287 AC245052.3-201ENST00000450182 901 ntBASIC19.43■□□□□ 0.7
URB1O60287 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.43■□□□□ 0.7
URB1O60287 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
URB1O60287 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
URB1O60287 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.43■□□□□ 0.7
URB1O60287 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
URB1O60287 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
URB1O60287 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.43■□□□□ 0.7
URB1O60287 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
URB1O60287 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
URB1O60287 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.42■□□□□ 0.7
URB1O60287 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
URB1O60287 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.42■□□□□ 0.7
URB1O60287 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
URB1O60287 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
URB1O60287 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
URB1O60287 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.42■□□□□ 0.7
URB1O60287 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
URB1O60287 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
URB1O60287 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
URB1O60287 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.42■□□□□ 0.7
URB1O60287 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
URB1O60287 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
URB1O60287 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
URB1O60287 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.42■□□□□ 0.7
URB1O60287 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.42■□□□□ 0.7
URB1O60287 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.42■□□□□ 0.7
URB1O60287 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.42■□□□□ 0.7
URB1O60287 MIR6786-201ENST00000616843 113 ntBASIC19.42■□□□□ 0.7
URB1O60287 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.42■□□□□ 0.7
URB1O60287 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
URB1O60287 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
URB1O60287 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
URB1O60287 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
URB1O60287 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
URB1O60287 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
URB1O60287 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.41■□□□□ 0.7
URB1O60287 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
URB1O60287 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
URB1O60287 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
URB1O60287 KRASP1-201ENST00000407852 552 ntBASIC19.41■□□□□ 0.7
URB1O60287 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
URB1O60287 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
URB1O60287 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
URB1O60287 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
URB1O60287 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
URB1O60287 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.41■□□□□ 0.7
URB1O60287 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
URB1O60287 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
URB1O60287 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
URB1O60287 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
URB1O60287 AC005521.1-201ENST00000393351 872 ntBASIC19.4■□□□□ 0.7
URB1O60287 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.4■□□□□ 0.7
URB1O60287 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
URB1O60287 AC145285.6-201ENST00000604632 637 ntBASIC19.4■□□□□ 0.7
URB1O60287 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
URB1O60287 KRT8P9-201ENST00000558927 1449 ntBASIC19.4■□□□□ 0.7
URB1O60287 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.4■□□□□ 0.7
URB1O60287 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
URB1O60287 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
URB1O60287 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms