Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH7O60245 AC027702.1-201ENST00000563810 1770 ntBASIC19.63■□□□□ 0.73
PCDH7O60245 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCDH7O60245 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH7O60245 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH7O60245 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH7O60245 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
PCDH7O60245 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDH7O60245 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDH7O60245 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDH7O60245 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDH7O60245 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PCDH7O60245 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCDH7O60245 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
PCDH7O60245 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH7O60245 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH7O60245 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH7O60245 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PCDH7O60245 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH7O60245 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH7O60245 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PCDH7O60245 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH7O60245 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH7O60245 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDH7O60245 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.62■□□□□ 0.73
PCDH7O60245 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDH7O60245 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDH7O60245 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH7O60245 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH7O60245 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH7O60245 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH7O60245 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH7O60245 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH7O60245 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH7O60245 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PCDH7O60245 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH7O60245 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PCDH7O60245 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDH7O60245 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH7O60245 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH7O60245 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH7O60245 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDH7O60245 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH7O60245 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH7O60245 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.61■□□□□ 0.73
PCDH7O60245 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCDH7O60245 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH7O60245 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDH7O60245 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH7O60245 AC116050.2-201ENST00000612102 1779 ntBASIC19.61■□□□□ 0.73
PCDH7O60245 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDH7O60245 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH7O60245 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH7O60245 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDH7O60245 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDH7O60245 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH7O60245 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDH7O60245 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH7O60245 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDH7O60245 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH7O60245 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PCDH7O60245 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH7O60245 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH7O60245 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH7O60245 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH7O60245 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDH7O60245 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH7O60245 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH7O60245 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDH7O60245 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH7O60245 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH7O60245 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH7O60245 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH7O60245 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDH7O60245 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH7O60245 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PCDH7O60245 AC097381.1-201ENST00000429019 1296 ntBASIC19.6■□□□□ 0.73
PCDH7O60245 AC034268.1-201ENST00000441047 882 ntBASIC19.6■□□□□ 0.73
PCDH7O60245 SLC7A5P1-201ENST00000568957 537 ntBASIC19.6■□□□□ 0.73
PCDH7O60245 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDH7O60245 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PCDH7O60245 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDH7O60245 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDH7O60245 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH7O60245 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH7O60245 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH7O60245 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDH7O60245 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDH7O60245 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH7O60245 RBM17P2-201ENST00000616397 1405 ntBASIC19.59■□□□□ 0.73
PCDH7O60245 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH7O60245 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PCDH7O60245 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.59■□□□□ 0.73
PCDH7O60245 AC019069.1-201ENST00000610008 1333 ntBASIC19.59■□□□□ 0.73
PCDH7O60245 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH7O60245 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH7O60245 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH7O60245 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH7O60245 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH7O60245 UBE2DNL-204ENST00000602536 740 ntBASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms