Protein–RNA interactions for Protein: O43464

HTRA2, Serine protease HTRA2, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA2O43464 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
HTRA2O43464 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HTRA2O43464 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
HTRA2O43464 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.78■□□□□ 0.92
HTRA2O43464 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.78■□□□□ 0.92
HTRA2O43464 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.78■□□□□ 0.92
HTRA2O43464 AC008694.1-202ENST00000636953 945 ntBASIC20.78■□□□□ 0.92
HTRA2O43464 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
HTRA2O43464 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTRA2O43464 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HTRA2O43464 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
HTRA2O43464 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.77■□□□□ 0.92
HTRA2O43464 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HTRA2O43464 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
HTRA2O43464 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HTRA2O43464 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HTRA2O43464 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.77■□□□□ 0.92
HTRA2O43464 AC083906.2-201ENST00000511578 360 ntBASIC20.77■□□□□ 0.92
HTRA2O43464 AF201337.1-201ENST00000520239 748 ntBASIC20.77■□□□□ 0.92
HTRA2O43464 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.77■□□□□ 0.92
HTRA2O43464 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.77■□□□□ 0.92
HTRA2O43464 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HTRA2O43464 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
HTRA2O43464 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.77■□□□□ 0.92
HTRA2O43464 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.77■□□□□ 0.92
HTRA2O43464 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HTRA2O43464 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HTRA2O43464 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HTRA2O43464 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.76■□□□□ 0.91
HTRA2O43464 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HTRA2O43464 GPX1P1-201ENST00000388829 606 ntBASIC20.76■□□□□ 0.91
HTRA2O43464 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HTRA2O43464 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HTRA2O43464 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
HTRA2O43464 AL121603.2-201ENST00000557373 2117 ntBASIC20.76■□□□□ 0.91
HTRA2O43464 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HTRA2O43464 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.76■□□□□ 0.91
HTRA2O43464 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.76■□□□□ 0.91
HTRA2O43464 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HTRA2O43464 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HTRA2O43464 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HTRA2O43464 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HTRA2O43464 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HTRA2O43464 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HTRA2O43464 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HTRA2O43464 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
HTRA2O43464 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HTRA2O43464 GUSBP6-202ENST00000438529 1198 ntBASIC20.75■□□□□ 0.91
HTRA2O43464 AC093787.1-201ENST00000450396 207 ntBASIC20.75■□□□□ 0.91
HTRA2O43464 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.75■□□□□ 0.91
HTRA2O43464 AC105036.2-201ENST00000569468 176 ntBASIC20.75■□□□□ 0.91
HTRA2O43464 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.75■□□□□ 0.91
HTRA2O43464 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.75■□□□□ 0.91
HTRA2O43464 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.75■□□□□ 0.91
HTRA2O43464 AC100791.3-201ENST00000617619 330 ntBASIC20.75■□□□□ 0.91
HTRA2O43464 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HTRA2O43464 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.75■□□□□ 0.91
HTRA2O43464 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HTRA2O43464 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HTRA2O43464 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HTRA2O43464 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
HTRA2O43464 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HTRA2O43464 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HTRA2O43464 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HTRA2O43464 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HTRA2O43464 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HTRA2O43464 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HTRA2O43464 ID1-201ENST00000376105 1233 ntBASIC20.74■□□□□ 0.91
HTRA2O43464 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HTRA2O43464 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HTRA2O43464 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HTRA2O43464 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HTRA2O43464 AC005229.4-201ENST00000610085 2198 ntBASIC20.74■□□□□ 0.91
HTRA2O43464 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.74■□□□□ 0.91
HTRA2O43464 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.74■□□□□ 0.91
HTRA2O43464 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HTRA2O43464 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HTRA2O43464 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
HTRA2O43464 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HTRA2O43464 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HTRA2O43464 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.73■□□□□ 0.91
HTRA2O43464 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HTRA2O43464 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HTRA2O43464 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HTRA2O43464 AC121338.2-201ENST00000622535 1744 ntBASIC20.73■□□□□ 0.91
HTRA2O43464 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HTRA2O43464 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HTRA2O43464 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HTRA2O43464 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HTRA2O43464 TSPY6P-201ENST00000448518 926 ntBASIC20.73■□□□□ 0.91
HTRA2O43464 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HTRA2O43464 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.73■□□□□ 0.91
HTRA2O43464 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
HTRA2O43464 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HTRA2O43464 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HTRA2O43464 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
HTRA2O43464 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
HTRA2O43464 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
HTRA2O43464 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HTRA2O43464 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms