Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.19■□□□□ 0.82
CDC7O00311 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.19■□□□□ 0.82
CDC7O00311 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDC7O00311 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.19■□□□□ 0.82
CDC7O00311 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.19■□□□□ 0.82
CDC7O00311 NTF6G-201ENST00000591094 616 ntBASIC20.19■□□□□ 0.82
CDC7O00311 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CDC7O00311 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CDC7O00311 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDC7O00311 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDC7O00311 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDC7O00311 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.19■□□□□ 0.82
CDC7O00311 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CDC7O00311 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.19■□□□□ 0.82
CDC7O00311 RBM17P2-201ENST00000616397 1405 ntBASIC20.19■□□□□ 0.82
CDC7O00311 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDC7O00311 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.18■□□□□ 0.82
CDC7O00311 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDC7O00311 AL121603.2-201ENST00000557373 2117 ntBASIC20.18■□□□□ 0.82
CDC7O00311 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.18■□□□□ 0.82
CDC7O00311 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.18■□□□□ 0.82
CDC7O00311 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.18■□□□□ 0.82
CDC7O00311 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CDC7O00311 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDC7O00311 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.18■□□□□ 0.82
CDC7O00311 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.18■□□□□ 0.82
CDC7O00311 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
CDC7O00311 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CDC7O00311 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDC7O00311 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CDC7O00311 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.18■□□□□ 0.82
CDC7O00311 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.18■□□□□ 0.82
CDC7O00311 UBE2DNL-204ENST00000602536 740 ntBASIC20.18■□□□□ 0.82
CDC7O00311 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.18■□□□□ 0.82
CDC7O00311 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.18■□□□□ 0.82
CDC7O00311 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDC7O00311 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDC7O00311 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.18■□□□□ 0.82
CDC7O00311 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDC7O00311 AC020907.5-201ENST00000624372 1936 ntBASIC20.17■□□□□ 0.82
CDC7O00311 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDC7O00311 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDC7O00311 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.17■□□□□ 0.82
CDC7O00311 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.17■□□□□ 0.82
CDC7O00311 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.17■□□□□ 0.82
CDC7O00311 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDC7O00311 AC116050.2-201ENST00000612102 1779 ntBASIC20.17■□□□□ 0.82
CDC7O00311 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDC7O00311 AC034268.1-201ENST00000441047 882 ntBASIC20.17■□□□□ 0.82
CDC7O00311 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDC7O00311 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDC7O00311 MIR6821-201ENST00000617625 74 ntBASIC20.17■□□□□ 0.82
CDC7O00311 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDC7O00311 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDC7O00311 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDC7O00311 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDC7O00311 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC7O00311 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.16■□□□□ 0.82
CDC7O00311 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.16■□□□□ 0.82
CDC7O00311 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC7O00311 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.16■□□□□ 0.82
CDC7O00311 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.16■□□□□ 0.82
CDC7O00311 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDC7O00311 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CDC7O00311 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
CDC7O00311 AC091799.1-201ENST00000422823 811 ntBASIC20.16■□□□□ 0.82
CDC7O00311 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDC7O00311 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.16■□□□□ 0.82
CDC7O00311 SLC7A5P1-201ENST00000568957 537 ntBASIC20.16■□□□□ 0.82
CDC7O00311 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDC7O00311 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC7O00311 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CDC7O00311 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.16■□□□□ 0.82
CDC7O00311 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.16■□□□□ 0.82
CDC7O00311 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.16■□□□□ 0.82
CDC7O00311 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDC7O00311 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.16■□□□□ 0.82
CDC7O00311 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC7O00311 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC7O00311 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.15■□□□□ 0.82
CDC7O00311 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC7O00311 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.15■□□□□ 0.82
CDC7O00311 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC7O00311 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.15■□□□□ 0.82
CDC7O00311 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.15■□□□□ 0.82
CDC7O00311 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC7O00311 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.15■□□□□ 0.82
CDC7O00311 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CDC7O00311 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.15■□□□□ 0.82
CDC7O00311 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.15■□□□□ 0.82
CDC7O00311 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDC7O00311 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC7O00311 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CDC7O00311 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDC7O00311 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC7O00311 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC7O00311 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC7O00311 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC7O00311 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC7O00311 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms