Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
TNFRSF11BO00300 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
TNFRSF11BO00300 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TNFRSF11BO00300 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF11BO00300 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF11BO00300 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF11BO00300 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19■□□□□ 0.63
TNFRSF11BO00300 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF11BO00300 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TNFRSF11BO00300 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF11BO00300 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF11BO00300 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19■□□□□ 0.63
TNFRSF11BO00300 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF11BO00300 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19■□□□□ 0.63
TNFRSF11BO00300 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19■□□□□ 0.63
TNFRSF11BO00300 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF11BO00300 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TNFRSF11BO00300 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF11BO00300 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF11BO00300 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFRSF11BO00300 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF11BO00300 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFRSF11BO00300 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF11BO00300 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFRSF11BO00300 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.99■□□□□ 0.63
TNFRSF11BO00300 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF11BO00300 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF11BO00300 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF11BO00300 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF11BO00300 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF11BO00300 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF11BO00300 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF11BO00300 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF11BO00300 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFRSF11BO00300 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF11BO00300 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFRSF11BO00300 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF11BO00300 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF11BO00300 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.98■□□□□ 0.63
TNFRSF11BO00300 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF11BO00300 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF11BO00300 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF11BO00300 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.98■□□□□ 0.63
TNFRSF11BO00300 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF11BO00300 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF11BO00300 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF11BO00300 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF11BO00300 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF11BO00300 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF11BO00300 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.98■□□□□ 0.63
TNFRSF11BO00300 AC105233.4-201ENST00000642045 216 ntBASIC18.98■□□□□ 0.63
TNFRSF11BO00300 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF11BO00300 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
TNFRSF11BO00300 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TNFRSF11BO00300 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.98■□□□□ 0.63
TNFRSF11BO00300 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF11BO00300 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TNFRSF11BO00300 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF11BO00300 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF11BO00300 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF11BO00300 AP004607.4-201ENST00000530158 1459 ntBASIC18.97■□□□□ 0.63
TNFRSF11BO00300 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TNFRSF11BO00300 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF11BO00300 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.97■□□□□ 0.63
TNFRSF11BO00300 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF11BO00300 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TNFRSF11BO00300 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.97■□□□□ 0.63
TNFRSF11BO00300 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.97■□□□□ 0.63
TNFRSF11BO00300 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF11BO00300 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.97■□□□□ 0.63
TNFRSF11BO00300 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF11BO00300 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF11BO00300 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.97■□□□□ 0.63
TNFRSF11BO00300 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.97■□□□□ 0.63
TNFRSF11BO00300 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.97■□□□□ 0.63
TNFRSF11BO00300 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.97■□□□□ 0.63
TNFRSF11BO00300 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TNFRSF11BO00300 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.97■□□□□ 0.63
TNFRSF11BO00300 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF11BO00300 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF11BO00300 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF11BO00300 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF11BO00300 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF11BO00300 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
TNFRSF11BO00300 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.96■□□□□ 0.63
TNFRSF11BO00300 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF11BO00300 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF11BO00300 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TNFRSF11BO00300 UNC93B3-201ENST00000308076 687 ntBASIC18.96■□□□□ 0.63
TNFRSF11BO00300 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TNFRSF11BO00300 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF11BO00300 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF11BO00300 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF11BO00300 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
TNFRSF11BO00300 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.96■□□□□ 0.63
TNFRSF11BO00300 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF11BO00300 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TNFRSF11BO00300 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF11BO00300 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF11BO00300 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms