Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CFAP99D6REC4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CFAP99D6REC4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CFAP99D6REC4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CFAP99D6REC4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.48■□□□□ 0.87
CFAP99D6REC4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CFAP99D6REC4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.48■□□□□ 0.87
CFAP99D6REC4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CFAP99D6REC4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.48■□□□□ 0.87
CFAP99D6REC4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CFAP99D6REC4 CDV3P1-201ENST00000471403 739 ntBASIC20.48■□□□□ 0.87
CFAP99D6REC4 AC007322.4-201ENST00000509611 723 ntBASIC20.48■□□□□ 0.87
CFAP99D6REC4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.48■□□□□ 0.87
CFAP99D6REC4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CFAP99D6REC4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.48■□□□□ 0.87
CFAP99D6REC4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CFAP99D6REC4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CFAP99D6REC4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.47■□□□□ 0.87
CFAP99D6REC4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CFAP99D6REC4 AC091799.1-201ENST00000422823 811 ntBASIC20.47■□□□□ 0.87
CFAP99D6REC4 DUX4L16-201ENST00000555130 1264 ntBASIC20.47■□□□□ 0.87
CFAP99D6REC4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.47■□□□□ 0.87
CFAP99D6REC4 AC080038.1-201ENST00000611274 1154 ntBASIC20.47■□□□□ 0.87
CFAP99D6REC4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.47■□□□□ 0.87
CFAP99D6REC4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CFAP99D6REC4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CFAP99D6REC4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CFAP99D6REC4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CFAP99D6REC4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CFAP99D6REC4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CFAP99D6REC4 AC007322.1-201ENST00000426983 750 ntBASIC20.46■□□□□ 0.87
CFAP99D6REC4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CFAP99D6REC4 AL591742.1-201ENST00000604433 565 ntBASIC20.46■□□□□ 0.87
CFAP99D6REC4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.46■□□□□ 0.87
CFAP99D6REC4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CFAP99D6REC4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
CFAP99D6REC4 AC116050.2-201ENST00000612102 1779 ntBASIC20.46■□□□□ 0.87
CFAP99D6REC4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CFAP99D6REC4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.46■□□□□ 0.87
CFAP99D6REC4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CFAP99D6REC4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CFAP99D6REC4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.45■□□□□ 0.86
CFAP99D6REC4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CFAP99D6REC4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CFAP99D6REC4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CFAP99D6REC4 AC005229.4-201ENST00000610085 2198 ntBASIC20.45■□□□□ 0.86
CFAP99D6REC4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CFAP99D6REC4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CFAP99D6REC4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CFAP99D6REC4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CFAP99D6REC4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CFAP99D6REC4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CFAP99D6REC4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CFAP99D6REC4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CFAP99D6REC4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.45■□□□□ 0.86
CFAP99D6REC4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CFAP99D6REC4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CFAP99D6REC4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CFAP99D6REC4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.44■□□□□ 0.86
CFAP99D6REC4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CFAP99D6REC4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.44■□□□□ 0.86
CFAP99D6REC4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CFAP99D6REC4 AC007322.3-201ENST00000426526 701 ntBASIC20.44■□□□□ 0.86
CFAP99D6REC4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.44■□□□□ 0.86
CFAP99D6REC4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.44■□□□□ 0.86
CFAP99D6REC4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.44■□□□□ 0.86
CFAP99D6REC4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.44■□□□□ 0.86
CFAP99D6REC4 AL162412.1-201ENST00000567129 965 ntBASIC20.44■□□□□ 0.86
CFAP99D6REC4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.44■□□□□ 0.86
CFAP99D6REC4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CFAP99D6REC4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.44■□□□□ 0.86
CFAP99D6REC4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CFAP99D6REC4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CFAP99D6REC4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CFAP99D6REC4 AC121338.2-201ENST00000622535 1744 ntBASIC20.44■□□□□ 0.86
CFAP99D6REC4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CFAP99D6REC4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
CFAP99D6REC4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CFAP99D6REC4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CFAP99D6REC4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CFAP99D6REC4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CFAP99D6REC4 AC011484.1-201ENST00000377652 1995 ntBASIC20.43■□□□□ 0.86
CFAP99D6REC4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CFAP99D6REC4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CFAP99D6REC4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CFAP99D6REC4 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.43■□□□□ 0.86
CFAP99D6REC4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.43■□□□□ 0.86
CFAP99D6REC4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CFAP99D6REC4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
CFAP99D6REC4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CFAP99D6REC4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.43■□□□□ 0.86
CFAP99D6REC4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CFAP99D6REC4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.43■□□□□ 0.86
CFAP99D6REC4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CFAP99D6REC4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CFAP99D6REC4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CFAP99D6REC4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CFAP99D6REC4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CFAP99D6REC4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CFAP99D6REC4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms