Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM235A6NFC5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM235A6NFC5 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
TMEM235A6NFC5 GUSBP5-201ENST00000418136 578 ntBASIC17.53■□□□□ 0.4
TMEM235A6NFC5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.53■□□□□ 0.4
TMEM235A6NFC5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.53■□□□□ 0.4
TMEM235A6NFC5 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM235A6NFC5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM235A6NFC5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.53■□□□□ 0.4
TMEM235A6NFC5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.53■□□□□ 0.4
TMEM235A6NFC5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM235A6NFC5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM235A6NFC5 AC055733.4-201ENST00000638462 1354 ntBASIC17.53■□□□□ 0.4
TMEM235A6NFC5 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TMEM235A6NFC5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.52■□□□□ 0.4
TMEM235A6NFC5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM235A6NFC5 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM235A6NFC5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM235A6NFC5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM235A6NFC5 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM235A6NFC5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM235A6NFC5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM235A6NFC5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TMEM235A6NFC5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM235A6NFC5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TMEM235A6NFC5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM235A6NFC5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.52■□□□□ 0.4
TMEM235A6NFC5 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.52■□□□□ 0.4
TMEM235A6NFC5 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.52■□□□□ 0.4
TMEM235A6NFC5 AC009237.3-201ENST00000393279 1427 ntBASIC17.52■□□□□ 0.4
TMEM235A6NFC5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.52■□□□□ 0.4
TMEM235A6NFC5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TMEM235A6NFC5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM235A6NFC5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TMEM235A6NFC5 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
TMEM235A6NFC5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM235A6NFC5 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
TMEM235A6NFC5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM235A6NFC5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.52■□□□□ 0.39
TMEM235A6NFC5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM235A6NFC5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM235A6NFC5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM235A6NFC5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM235A6NFC5 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
TMEM235A6NFC5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
TMEM235A6NFC5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
TMEM235A6NFC5 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM235A6NFC5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM235A6NFC5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TMEM235A6NFC5 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TMEM235A6NFC5 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM235A6NFC5 AL035685.1-201ENST00000636663 812 ntBASIC17.51■□□□□ 0.39
TMEM235A6NFC5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TMEM235A6NFC5 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TMEM235A6NFC5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM235A6NFC5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM235A6NFC5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM235A6NFC5 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM235A6NFC5 AC011484.1-201ENST00000377652 1995 ntBASIC17.51■□□□□ 0.39
TMEM235A6NFC5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.51■□□□□ 0.39
TMEM235A6NFC5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM235A6NFC5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM235A6NFC5 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEM235A6NFC5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM235A6NFC5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM235A6NFC5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TMEM235A6NFC5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM235A6NFC5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM235A6NFC5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM235A6NFC5 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM235A6NFC5 MIR4466-201ENST00000606121 54 ntBASIC17.5■□□□□ 0.39
TMEM235A6NFC5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM235A6NFC5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM235A6NFC5 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM235A6NFC5 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM235A6NFC5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM235A6NFC5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM235A6NFC5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TMEM235A6NFC5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM235A6NFC5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM235A6NFC5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM235A6NFC5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM235A6NFC5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEM235A6NFC5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM235A6NFC5 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM235A6NFC5 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM235A6NFC5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM235A6NFC5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TMEM235A6NFC5 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM235A6NFC5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM235A6NFC5 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM235A6NFC5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM235A6NFC5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM235A6NFC5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM235A6NFC5 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TMEM235A6NFC5 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM235A6NFC5 AC133561.4-201ENST00000566112 224 ntBASIC17.49■□□□□ 0.39
TMEM235A6NFC5 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.49■□□□□ 0.39
TMEM235A6NFC5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM235A6NFC5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms