Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
TBC1D3BA6NDS4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D3BA6NDS4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D3BA6NDS4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D3BA6NDS4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D3BA6NDS4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TBC1D3BA6NDS4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.96■□□□□ 0.95
TBC1D3BA6NDS4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D3BA6NDS4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D3BA6NDS4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.95■□□□□ 0.95
TBC1D3BA6NDS4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.95■□□□□ 0.95
TBC1D3BA6NDS4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TBC1D3BA6NDS4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TBC1D3BA6NDS4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.95■□□□□ 0.94
TBC1D3BA6NDS4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TBC1D3BA6NDS4 KRT17P3-201ENST00000420566 1262 ntBASIC20.95■□□□□ 0.94
TBC1D3BA6NDS4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.95■□□□□ 0.94
TBC1D3BA6NDS4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.95■□□□□ 0.94
TBC1D3BA6NDS4 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.95■□□□□ 0.94
TBC1D3BA6NDS4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.95■□□□□ 0.94
TBC1D3BA6NDS4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TBC1D3BA6NDS4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.95■□□□□ 0.94
TBC1D3BA6NDS4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
TBC1D3BA6NDS4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TBC1D3BA6NDS4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TBC1D3BA6NDS4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TBC1D3BA6NDS4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TBC1D3BA6NDS4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TBC1D3BA6NDS4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.94■□□□□ 0.94
TBC1D3BA6NDS4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.94■□□□□ 0.94
TBC1D3BA6NDS4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.94■□□□□ 0.94
TBC1D3BA6NDS4 ECEL1P1-201ENST00000373592 1742 ntBASIC20.94■□□□□ 0.94
TBC1D3BA6NDS4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TBC1D3BA6NDS4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TBC1D3BA6NDS4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TBC1D3BA6NDS4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TBC1D3BA6NDS4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.94■□□□□ 0.94
TBC1D3BA6NDS4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.93■□□□□ 0.94
TBC1D3BA6NDS4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TBC1D3BA6NDS4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TBC1D3BA6NDS4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.93■□□□□ 0.94
TBC1D3BA6NDS4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TBC1D3BA6NDS4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TBC1D3BA6NDS4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TBC1D3BA6NDS4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.93■□□□□ 0.94
TBC1D3BA6NDS4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.93■□□□□ 0.94
TBC1D3BA6NDS4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TBC1D3BA6NDS4 SOX15-203ENST00000570788 1093 ntBASIC20.93■□□□□ 0.94
TBC1D3BA6NDS4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.93■□□□□ 0.94
TBC1D3BA6NDS4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TBC1D3BA6NDS4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.93■□□□□ 0.94
TBC1D3BA6NDS4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TBC1D3BA6NDS4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TBC1D3BA6NDS4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.93■□□□□ 0.94
TBC1D3BA6NDS4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
TBC1D3BA6NDS4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TBC1D3BA6NDS4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TBC1D3BA6NDS4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.92■□□□□ 0.94
TBC1D3BA6NDS4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TBC1D3BA6NDS4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TBC1D3BA6NDS4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TBC1D3BA6NDS4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TBC1D3BA6NDS4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.92■□□□□ 0.94
TBC1D3BA6NDS4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TBC1D3BA6NDS4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TBC1D3BA6NDS4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.92■□□□□ 0.94
TBC1D3BA6NDS4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.92■□□□□ 0.94
TBC1D3BA6NDS4 C2orf69P4-201ENST00000565394 541 ntBASIC20.92■□□□□ 0.94
TBC1D3BA6NDS4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.92■□□□□ 0.94
TBC1D3BA6NDS4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.92■□□□□ 0.94
TBC1D3BA6NDS4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TBC1D3BA6NDS4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TBC1D3BA6NDS4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TBC1D3BA6NDS4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
TBC1D3BA6NDS4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TBC1D3BA6NDS4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TBC1D3BA6NDS4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TBC1D3BA6NDS4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.91■□□□□ 0.94
TBC1D3BA6NDS4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TBC1D3BA6NDS4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
TBC1D3BA6NDS4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TBC1D3BA6NDS4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TBC1D3BA6NDS4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TBC1D3BA6NDS4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
TBC1D3BA6NDS4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TBC1D3BA6NDS4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TBC1D3BA6NDS4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TBC1D3BA6NDS4 PGM5P4-201ENST00000421970 445 ntBASIC20.91■□□□□ 0.94
TBC1D3BA6NDS4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TBC1D3BA6NDS4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.91■□□□□ 0.94
TBC1D3BA6NDS4 RPS2P4-201ENST00000476944 856 ntBASIC20.91■□□□□ 0.94
TBC1D3BA6NDS4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TBC1D3BA6NDS4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.91■□□□□ 0.94
TBC1D3BA6NDS4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.91■□□□□ 0.94
TBC1D3BA6NDS4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.91■□□□□ 0.94
TBC1D3BA6NDS4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.91■□□□□ 0.94
TBC1D3BA6NDS4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TBC1D3BA6NDS4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.9■□□□□ 0.94
TBC1D3BA6NDS4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TBC1D3BA6NDS4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms