Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.59■□□□□ 0.73
LRIT2A6NDA9 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRIT2A6NDA9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRIT2A6NDA9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LRIT2A6NDA9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LRIT2A6NDA9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LRIT2A6NDA9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRIT2A6NDA9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
LRIT2A6NDA9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRIT2A6NDA9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.58■□□□□ 0.73
LRIT2A6NDA9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
LRIT2A6NDA9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
LRIT2A6NDA9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LRIT2A6NDA9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
LRIT2A6NDA9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.58■□□□□ 0.72
LRIT2A6NDA9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.58■□□□□ 0.72
LRIT2A6NDA9 AC016405.3-201ENST00000607710 860 ntBASIC19.58■□□□□ 0.72
LRIT2A6NDA9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.58■□□□□ 0.72
LRIT2A6NDA9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRIT2A6NDA9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRIT2A6NDA9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.58■□□□□ 0.72
LRIT2A6NDA9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRIT2A6NDA9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRIT2A6NDA9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LRIT2A6NDA9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.57■□□□□ 0.72
LRIT2A6NDA9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRIT2A6NDA9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LRIT2A6NDA9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
LRIT2A6NDA9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.57■□□□□ 0.72
LRIT2A6NDA9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.57■□□□□ 0.72
LRIT2A6NDA9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
LRIT2A6NDA9 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRIT2A6NDA9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
LRIT2A6NDA9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRIT2A6NDA9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
LRIT2A6NDA9 AC007225.1-201ENST00000566331 1836 ntBASIC19.57■□□□□ 0.72
LRIT2A6NDA9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRIT2A6NDA9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LRIT2A6NDA9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRIT2A6NDA9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.57■□□□□ 0.72
LRIT2A6NDA9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRIT2A6NDA9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.56■□□□□ 0.72
LRIT2A6NDA9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRIT2A6NDA9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRIT2A6NDA9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.56■□□□□ 0.72
LRIT2A6NDA9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LRIT2A6NDA9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRIT2A6NDA9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.56■□□□□ 0.72
LRIT2A6NDA9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
LRIT2A6NDA9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.56■□□□□ 0.72
LRIT2A6NDA9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.56■□□□□ 0.72
LRIT2A6NDA9 RAP2CP1-201ENST00000605103 478 ntBASIC19.56■□□□□ 0.72
LRIT2A6NDA9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRIT2A6NDA9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRIT2A6NDA9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.56■□□□□ 0.72
LRIT2A6NDA9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.56■□□□□ 0.72
LRIT2A6NDA9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRIT2A6NDA9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRIT2A6NDA9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
LRIT2A6NDA9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRIT2A6NDA9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.55■□□□□ 0.72
LRIT2A6NDA9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRIT2A6NDA9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRIT2A6NDA9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
LRIT2A6NDA9 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.55■□□□□ 0.72
LRIT2A6NDA9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRIT2A6NDA9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.55■□□□□ 0.72
LRIT2A6NDA9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.55■□□□□ 0.72
LRIT2A6NDA9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRIT2A6NDA9 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRIT2A6NDA9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRIT2A6NDA9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.55■□□□□ 0.72
LRIT2A6NDA9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LRIT2A6NDA9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRIT2A6NDA9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRIT2A6NDA9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRIT2A6NDA9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRIT2A6NDA9 FP700111.2-201ENST00000619190 1892 ntBASIC19.54■□□□□ 0.72
LRIT2A6NDA9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
LRIT2A6NDA9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRIT2A6NDA9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRIT2A6NDA9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRIT2A6NDA9 CYP2T1P-201ENST00000432607 1285 ntBASIC19.54■□□□□ 0.72
LRIT2A6NDA9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.54■□□□□ 0.72
LRIT2A6NDA9 AC026185.1-201ENST00000445748 174 ntBASIC19.54■□□□□ 0.72
LRIT2A6NDA9 RARRES2P4-201ENST00000514074 484 ntBASIC19.54■□□□□ 0.72
LRIT2A6NDA9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.54■□□□□ 0.72
LRIT2A6NDA9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRIT2A6NDA9 AC005181.1-201ENST00000604782 1256 ntBASIC19.54■□□□□ 0.72
LRIT2A6NDA9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.54■□□□□ 0.72
LRIT2A6NDA9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
LRIT2A6NDA9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRIT2A6NDA9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRIT2A6NDA9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRIT2A6NDA9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LRIT2A6NDA9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
LRIT2A6NDA9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRIT2A6NDA9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
LRIT2A6NDA9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRIT2A6NDA9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms