Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CCDC144AA2RUR9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC29.75■■■□□ 2.35
CCDC144AA2RUR9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CCDC144AA2RUR9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC29.75■■■□□ 2.35
CCDC144AA2RUR9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC29.75■■■□□ 2.35
CCDC144AA2RUR9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
CCDC144AA2RUR9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC29.75■■■□□ 2.35
CCDC144AA2RUR9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC29.75■■■□□ 2.35
CCDC144AA2RUR9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC29.75■■■□□ 2.35
CCDC144AA2RUR9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC29.75■■■□□ 2.35
CCDC144AA2RUR9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CCDC144AA2RUR9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC29.74■■■□□ 2.35
CCDC144AA2RUR9 C2orf69P4-201ENST00000565394 541 ntBASIC29.74■■■□□ 2.35
CCDC144AA2RUR9 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC29.74■■■□□ 2.35
CCDC144AA2RUR9 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CCDC144AA2RUR9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
CCDC144AA2RUR9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
CCDC144AA2RUR9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC29.74■■■□□ 2.35
CCDC144AA2RUR9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC29.74■■■□□ 2.35
CCDC144AA2RUR9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CCDC144AA2RUR9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC29.74■■■□□ 2.35
CCDC144AA2RUR9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
CCDC144AA2RUR9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CCDC144AA2RUR9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CCDC144AA2RUR9 FBXW4P1-201ENST00000426721 2239 ntBASIC29.73■■■□□ 2.35
CCDC144AA2RUR9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CCDC144AA2RUR9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CCDC144AA2RUR9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
CCDC144AA2RUR9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CCDC144AA2RUR9 UNC93B4-201ENST00000505679 747 ntBASIC29.73■■■□□ 2.35
CCDC144AA2RUR9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CCDC144AA2RUR9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC29.73■■■□□ 2.35
CCDC144AA2RUR9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC29.73■■■□□ 2.35
CCDC144AA2RUR9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
CCDC144AA2RUR9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CCDC144AA2RUR9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC29.73■■■□□ 2.35
CCDC144AA2RUR9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
CCDC144AA2RUR9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CCDC144AA2RUR9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CCDC144AA2RUR9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CCDC144AA2RUR9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC29.72■■■□□ 2.35
CCDC144AA2RUR9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CCDC144AA2RUR9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CCDC144AA2RUR9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CCDC144AA2RUR9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CCDC144AA2RUR9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CCDC144AA2RUR9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CCDC144AA2RUR9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CCDC144AA2RUR9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CCDC144AA2RUR9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC29.71■■■□□ 2.35
CCDC144AA2RUR9 OR2A1-AS1-207ENST00000486094 819 ntBASIC29.71■■■□□ 2.35
CCDC144AA2RUR9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC29.71■■■□□ 2.35
CCDC144AA2RUR9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC29.71■■■□□ 2.35
CCDC144AA2RUR9 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CCDC144AA2RUR9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC29.71■■■□□ 2.35
CCDC144AA2RUR9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CCDC144AA2RUR9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC29.71■■■□□ 2.35
CCDC144AA2RUR9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CCDC144AA2RUR9 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CCDC144AA2RUR9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CCDC144AA2RUR9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC29.71■■■□□ 2.35
CCDC144AA2RUR9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC29.71■■■□□ 2.35
CCDC144AA2RUR9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC29.71■■■□□ 2.35
CCDC144AA2RUR9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC29.7■■■□□ 2.35
CCDC144AA2RUR9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC29.7■■■□□ 2.35
CCDC144AA2RUR9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC29.7■■■□□ 2.35
CCDC144AA2RUR9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
CCDC144AA2RUR9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC29.7■■■□□ 2.34
CCDC144AA2RUR9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC29.7■■■□□ 2.34
CCDC144AA2RUR9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC29.7■■■□□ 2.34
CCDC144AA2RUR9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.34
CCDC144AA2RUR9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC29.7■■■□□ 2.34
CCDC144AA2RUR9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC29.7■■■□□ 2.34
CCDC144AA2RUR9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
CCDC144AA2RUR9 AC011484.1-201ENST00000377652 1995 ntBASIC29.7■■■□□ 2.34
CCDC144AA2RUR9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CCDC144AA2RUR9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
CCDC144AA2RUR9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC29.69■■■□□ 2.34
CCDC144AA2RUR9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC29.69■■■□□ 2.34
CCDC144AA2RUR9 AC069544.1-201ENST00000609399 999 ntBASIC29.69■■■□□ 2.34
CCDC144AA2RUR9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CCDC144AA2RUR9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CCDC144AA2RUR9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
CCDC144AA2RUR9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CCDC144AA2RUR9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC29.68■■■□□ 2.34
CCDC144AA2RUR9 AL158047.1-201ENST00000445918 881 ntBASIC29.68■■■□□ 2.34
CCDC144AA2RUR9 AC142381.4-202ENST00000563973 229 ntBASIC29.68■■■□□ 2.34
CCDC144AA2RUR9 AC233263.1-201ENST00000578059 224 ntBASIC29.68■■■□□ 2.34
CCDC144AA2RUR9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CCDC144AA2RUR9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CCDC144AA2RUR9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CCDC144AA2RUR9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC29.67■■■□□ 2.34
CCDC144AA2RUR9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
CCDC144AA2RUR9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CCDC144AA2RUR9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CCDC144AA2RUR9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
CCDC144AA2RUR9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC29.67■■■□□ 2.34
CCDC144AA2RUR9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC29.67■■■□□ 2.34
CCDC144AA2RUR9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC29.67■■■□□ 2.34
CCDC144AA2RUR9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms