Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CENPVL3A0A0U1RRI6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CENPVL3A0A0U1RRI6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CENPVL3A0A0U1RRI6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.7■□□□□ 0.26
CENPVL3A0A0U1RRI6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.7■□□□□ 0.26
CENPVL3A0A0U1RRI6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CENPVL3A0A0U1RRI6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CENPVL3A0A0U1RRI6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CENPVL3A0A0U1RRI6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CENPVL3A0A0U1RRI6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CENPVL3A0A0U1RRI6 POU5F1P3-201ENST00000428824 1078 ntBASIC16.7■□□□□ 0.26
CENPVL3A0A0U1RRI6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.7■□□□□ 0.26
CENPVL3A0A0U1RRI6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.7■□□□□ 0.26
CENPVL3A0A0U1RRI6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.7■□□□□ 0.26
CENPVL3A0A0U1RRI6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.7■□□□□ 0.26
CENPVL3A0A0U1RRI6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CENPVL3A0A0U1RRI6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.7■□□□□ 0.26
CENPVL3A0A0U1RRI6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CENPVL3A0A0U1RRI6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CENPVL3A0A0U1RRI6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CENPVL3A0A0U1RRI6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.7■□□□□ 0.26
CENPVL3A0A0U1RRI6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CENPVL3A0A0U1RRI6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 CLDN5-201ENST00000403084 2357 ntBASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CENPVL3A0A0U1RRI6 LINC00565-201ENST00000562710 2331 ntBASIC16.68■□□□□ 0.26
CENPVL3A0A0U1RRI6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CENPVL3A0A0U1RRI6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CENPVL3A0A0U1RRI6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CENPVL3A0A0U1RRI6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CENPVL3A0A0U1RRI6 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.68■□□□□ 0.26
CENPVL3A0A0U1RRI6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CENPVL3A0A0U1RRI6 AC105020.6-201ENST00000621523 1217 ntBASIC16.68■□□□□ 0.26
CENPVL3A0A0U1RRI6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.68■□□□□ 0.26
CENPVL3A0A0U1RRI6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CENPVL3A0A0U1RRI6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CENPVL3A0A0U1RRI6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CENPVL3A0A0U1RRI6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CENPVL3A0A0U1RRI6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CENPVL3A0A0U1RRI6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.68■□□□□ 0.26
CENPVL3A0A0U1RRI6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CENPVL3A0A0U1RRI6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CENPVL3A0A0U1RRI6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 AC087633.2-202ENST00000565166 1439 ntBASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.67■□□□□ 0.26
CENPVL3A0A0U1RRI6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.66■□□□□ 0.26
CENPVL3A0A0U1RRI6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms