Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 AC007029.1-201ENST00000604183 313 ntBASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 AC011270.2-201ENST00000624293 2550 ntBASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 LBH-205ENST00000407930 756 ntTSL 2 BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC11.68□□□□□ -0.54
TRAV22A0A0B4J277 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC11.67□□□□□ -0.54
TRAV22A0A0B4J277 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
TRAV22A0A0B4J277 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC11.66□□□□□ -0.54
TRAV22A0A0B4J277 AC020907.5-201ENST00000624372 1936 ntBASIC11.66□□□□□ -0.54
TRAV22A0A0B4J277 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRAV22A0A0B4J277 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRAV22A0A0B4J277 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC11.66□□□□□ -0.54
TRAV22A0A0B4J277 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC11.66□□□□□ -0.54
TRAV22A0A0B4J277 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRAV22A0A0B4J277 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
TRAV22A0A0B4J277 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
TRAV22A0A0B4J277 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRAV22A0A0B4J277 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRAV22A0A0B4J277 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRAV22A0A0B4J277 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
TRAV22A0A0B4J277 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRAV22A0A0B4J277 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRAV22A0A0B4J277 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRAV22A0A0B4J277 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRAV22A0A0B4J277 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRAV22A0A0B4J277 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms