Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SMIM9-201ENST00000369529 904 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
SLC1A1P43005 TMEM59-203ENST00000371341 1116 ntTSL 2 BASIC9.7□□□□□ -0.86
SLC1A1P43005 NUPR1-202ENST00000395641 550 ntTSL 2 BASIC9.7□□□□□ -0.86
SLC1A1P43005 FAM236D-201ENST00000419795 433 ntAPPRIS P5 TSL 5 BASIC9.7□□□□□ -0.86
SLC1A1P43005 Z98048.1-201ENST00000424746 491 ntBASIC9.7□□□□□ -0.86
SLC1A1P43005 AL606462.1-201ENST00000447187 451 ntBASIC9.7□□□□□ -0.86
SLC1A1P43005 FAM236D-202ENST00000458170 451 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
SLC1A1P43005 AC008770.1-204ENST00000489336 622 ntTSL 2 BASIC9.7□□□□□ -0.86
SLC1A1P43005 AC011716.1-201ENST00000520744 613 ntBASIC9.7□□□□□ -0.86
SLC1A1P43005 ST13P5-201ENST00000526214 1110 ntBASIC9.7□□□□□ -0.86
SLC1A1P43005 MORN5-205ENST00000536616 596 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SLC1A1P43005 WTAPP1-203ENST00000537774 400 ntBASIC9.7□□□□□ -0.86
SLC1A1P43005 AC018410.1-202ENST00000545474 492 ntTSL 2 BASIC9.7□□□□□ -0.86
SLC1A1P43005 FTLP14-201ENST00000562087 484 ntBASIC9.7□□□□□ -0.86
SLC1A1P43005 AC010531.3-201ENST00000569147 513 ntTSL 4 BASIC9.7□□□□□ -0.86
SLC1A1P43005 UBBP4-201ENST00000583708 689 ntBASIC9.7□□□□□ -0.86
SLC1A1P43005 RN7SL44P-201ENST00000583849 302 ntBASIC9.7□□□□□ -0.86
SLC1A1P43005 Z69706.1-201ENST00000595428 547 ntBASIC9.7□□□□□ -0.86
SLC1A1P43005 DSTNP2-202ENST00000602547 1105 ntBASIC9.7□□□□□ -0.86
SLC1A1P43005 AC025518.2-201ENST00000605229 492 ntBASIC9.7□□□□□ -0.86
SLC1A1P43005 LINC00969-266ENST00000626156 683 ntTSL 5 BASIC9.7□□□□□ -0.86
SLC1A1P43005 AC015978.1-201ENST00000635343 890 ntBASIC9.7□□□□□ -0.86
SLC1A1P43005 FAM236C-201ENST00000636267 463 ntAPPRIS P5 TSL 5 BASIC9.7□□□□□ -0.86
SLC1A1P43005 FAM236C-202ENST00000636532 451 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
SLC1A1P43005 PAX6-282ENST00000640975 2553 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
SLC1A1P43005 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SLC1A1P43005 SOCS4-202ENST00000395472 6779 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SLC1A1P43005 HS3ST5-202ENST00000411826 2744 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SLC1A1P43005 TCF4-205ENST00000537578 2767 ntTSL 2 BASIC9.7□□□□□ -0.86
SLC1A1P43005 KCNJ15-207ENST00000398934 2815 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
SLC1A1P43005 TFB1M-201ENST00000367166 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SLC1A1P43005 XIRP2-205ENST00000409605 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
SLC1A1P43005 RASSF6-203ENST00000342081 4331 ntAPPRIS P4 TSL 2 BASIC9.7□□□□□ -0.86
SLC1A1P43005 MAP7D3-203ENST00000370661 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
SLC1A1P43005 PEX2-204ENST00000520103 1470 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
SLC1A1P43005 MALAT1-201ENST00000508832 1519 ntTSL 2 BASIC9.7□□□□□ -0.86
SLC1A1P43005 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SLC1A1P43005 DSG4-201ENST00000308128 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SLC1A1P43005 YME1L1-203ENST00000376016 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SLC1A1P43005 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
SLC1A1P43005 ARHGAP42P2-201ENST00000416089 2140 ntBASIC9.7□□□□□ -0.86
SLC1A1P43005 USP2-AS1-201ENST00000498979 2486 ntTSL 3 BASIC9.7□□□□□ -0.86
SLC1A1P43005 TCTN3-207ENST00000614499 2739 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SLC1A1P43005 PLP1-223ENST00000621218 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SLC1A1P43005 GJA5-202ENST00000579774 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SLC1A1P43005 AL353588.1-201ENST00000505802 3513 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
SLC1A1P43005 TCF20-202ENST00000359486 7410 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SLC1A1P43005 POLD3-201ENST00000263681 3821 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SLC1A1P43005 CELF2-215ENST00000636488 3908 ntTSL 5 BASIC9.69□□□□□ -0.86
SLC1A1P43005 SYNJ1-211ENST00000630077 6898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SLC1A1P43005 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
SLC1A1P43005 MR1-201ENST00000282990 2043 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SLC1A1P43005 MMP26-201ENST00000300762 989 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SLC1A1P43005 BPNT1-201ENST00000322067 2465 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SLC1A1P43005 METAP2-202ENST00000323666 3601 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
SLC1A1P43005 LRTOMT-203ENST00000324866 2402 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SLC1A1P43005 MAPK10-202ENST00000359221 2668 ntTSL 5 BASIC9.69□□□□□ -0.86
SLC1A1P43005 TMEM252-201ENST00000377311 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SLC1A1P43005 CHODL-206ENST00000400135 2136 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SLC1A1P43005 AL590559.1-201ENST00000414338 374 ntBASIC9.69□□□□□ -0.86
SLC1A1P43005 AL592486.1-201ENST00000418343 1220 ntTSL 2 BASIC9.69□□□□□ -0.86
SLC1A1P43005 UBE2E1-203ENST00000424381 1224 ntTSL 2 BASIC9.69□□□□□ -0.86
SLC1A1P43005 AC084851.3-201ENST00000432771 573 ntBASIC9.69□□□□□ -0.86
SLC1A1P43005 AC022400.1-201ENST00000434147 445 ntTSL 3 BASIC9.69□□□□□ -0.86
SLC1A1P43005 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC9.69□□□□□ -0.86
SLC1A1P43005 AC104088.1-201ENST00000445613 510 ntTSL 5 BASIC9.69□□□□□ -0.86
SLC1A1P43005 GCNT1P3-201ENST00000450607 575 ntBASIC9.69□□□□□ -0.86
SLC1A1P43005 MRPL21-202ENST00000450904 662 ntTSL 2 BASIC9.69□□□□□ -0.86
SLC1A1P43005 IGHV3-64-201ENST00000454421 431 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
SLC1A1P43005 UBE2E1-206ENST00000467766 585 ntTSL 2 BASIC9.69□□□□□ -0.86
SLC1A1P43005 PTPRE-207ENST00000471218 522 ntTSL 3 BASIC9.69□□□□□ -0.86
SLC1A1P43005 AC020658.1-201ENST00000471253 938 ntBASIC9.69□□□□□ -0.86
SLC1A1P43005 RN7SL535P-201ENST00000479087 296 ntBASIC9.69□□□□□ -0.86
SLC1A1P43005 AC090311.1-201ENST00000490739 249 ntBASIC9.69□□□□□ -0.86
SLC1A1P43005 OCIAD1-210ENST00000506801 571 ntTSL 2 BASIC9.69□□□□□ -0.86
SLC1A1P43005 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SLC1A1P43005 AC008663.3-201ENST00000520300 457 ntTSL 3 BASIC9.69□□□□□ -0.86
SLC1A1P43005 AC022034.4-201ENST00000521930 469 ntTSL 3 BASIC9.69□□□□□ -0.86
SLC1A1P43005 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC9.69□□□□□ -0.86
SLC1A1P43005 AC117498.1-201ENST00000548742 713 ntTSL 2 BASIC9.69□□□□□ -0.86
SLC1A1P43005 RBMS2-207ENST00000552247 1471 ntTSL 5 BASIC9.69□□□□□ -0.86
SLC1A1P43005 LINC01571-201ENST00000563603 811 ntTSL 2 BASIC9.69□□□□□ -0.86
SLC1A1P43005 PSMG2-210ENST00000590217 1036 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SLC1A1P43005 ZNF415-209ENST00000595813 580 ntTSL 4 BASIC9.69□□□□□ -0.86
SLC1A1P43005 PCBP1-AS1-260ENST00000602091 959 ntTSL 5 BASIC9.69□□□□□ -0.86
SLC1A1P43005 KIAA0391-205ENST00000603544 2232 ntTSL 5 BASIC9.69□□□□□ -0.86
SLC1A1P43005 RNA5SP357-201ENST00000607318 119 ntBASIC9.69□□□□□ -0.86
SLC1A1P43005 AC040978.1-201ENST00000617244 1282 ntBASIC9.69□□□□□ -0.86
SLC1A1P43005 CDK10-221ENST00000617879 819 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SLC1A1P43005 RP1-206ENST00000636932 3649 ntTSL 5 BASIC9.69□□□□□ -0.86
SLC1A1P43005 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SLC1A1P43005 MSRB3-212ENST00000614640 4270 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
SLC1A1P43005 EMC1-202ENST00000375208 4084 ntTSL 2 BASIC9.69□□□□□ -0.86
SLC1A1P43005 TPP2-202ENST00000376065 3931 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SLC1A1P43005 DIS3L-201ENST00000319194 3763 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SLC1A1P43005 ANO2-202ENST00000356134 3717 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
SLC1A1P43005 NLRP4-201ENST00000301295 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SLC1A1P43005 CAPN3-206ENST00000397163 3228 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SLC1A1P43005 LINC02028-202ENST00000432154 2666 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SLC1A1P43005 LINC01344-203ENST00000608183 2631 ntTSL 2 BASIC9.69□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 352.8 ms