Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC090525.2-201ENST00000551685 2270 ntBASIC8.64□□□□□ -1.03
SNX18Q96RF0 MAPK10-316ENST00000641430 2285 ntBASIC8.64□□□□□ -1.03
SNX18Q96RF0 RSPH4A-203ENST00000368581 2704 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SNX18Q96RF0 PIWIL3-205ENST00000616349 3111 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNX18Q96RF0 AC099335.1-201ENST00000430498 1335 ntBASIC8.64□□□□□ -1.03
SNX18Q96RF0 PPP2R3C-213ENST00000555644 1347 ntTSL 2 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 CEP135-201ENST00000257287 5562 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNX18Q96RF0 APOBEC1-201ENST00000229304 879 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNX18Q96RF0 H3F3AP6-201ENST00000230495 411 ntBASIC8.64□□□□□ -1.03
SNX18Q96RF0 LECT2-201ENST00000274507 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNX18Q96RF0 RBP7-201ENST00000294435 636 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNX18Q96RF0 OR52K2-201ENST00000325719 1067 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 SNORA71E-201ENST00000365032 132 ntBASIC8.64□□□□□ -1.03
SNX18Q96RF0 VTRNA1-2-201ENST00000365241 89 ntBASIC8.64□□□□□ -1.03
SNX18Q96RF0 AC106795.2-203ENST00000366189 511 ntTSL 5 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 DYNLT1-203ENST00000367089 726 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNX18Q96RF0 H3F3AP4-201ENST00000369387 411 ntBASIC8.64□□□□□ -1.03
SNX18Q96RF0 MYOF-203ENST00000371488 763 ntTSL 2 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 AIF1L-202ENST00000372297 418 ntTSL 3 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 C10orf53-201ENST00000374111 799 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 TPM3P2-201ENST00000397772 723 ntBASIC8.64□□□□□ -1.03
SNX18Q96RF0 EIF4E2-206ENST00000409495 1014 ntTSL 2 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 SNHG26-201ENST00000415611 1099 ntTSL 5 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 AL359738.1-201ENST00000419667 430 ntTSL 5 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 Z83839.1-201ENST00000423412 630 ntBASIC8.64□□□□□ -1.03
SNX18Q96RF0 AC022431.2-201ENST00000431789 536 ntTSL 4 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 AL592546.1-201ENST00000448834 692 ntTSL 3 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 RFTN1P1-202ENST00000455527 996 ntBASIC8.64□□□□□ -1.03
SNX18Q96RF0 RPL6P8-201ENST00000490136 843 ntBASIC8.64□□□□□ -1.03
SNX18Q96RF0 AC130364.1-201ENST00000532682 795 ntBASIC8.64□□□□□ -1.03
SNX18Q96RF0 TSFM-209ENST00000548851 794 ntTSL 3 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 AL132777.1-201ENST00000556153 618 ntBASIC8.64□□□□□ -1.03
SNX18Q96RF0 SPATA8-AS1-202ENST00000560888 392 ntTSL 5 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 RPL17-207ENST00000580210 705 ntTSL 2 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 RN7SL220P-201ENST00000581978 300 ntBASIC8.64□□□□□ -1.03
SNX18Q96RF0 BOD1P1-201ENST00000584421 436 ntBASIC8.64□□□□□ -1.03
SNX18Q96RF0 AC006058.2-201ENST00000605537 548 ntBASIC8.64□□□□□ -1.03
SNX18Q96RF0 AC132825.5-201ENST00000640603 310 ntBASIC8.64□□□□□ -1.03
SNX18Q96RF0 CFAP57-201ENST00000372492 4244 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 MARF1-202ENST00000540441 7105 ntTSL 5 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 MAGEB16-201ENST00000399985 1667 ntAPPRIS P2 TSL 5 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 CC2D2A-203ENST00000438599 1673 ntTSL 5 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SNX18Q96RF0 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 SORL1-211ENST00000532694 3692 ntTSL 2 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 FAM196A-202ENST00000522781 4403 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNX18Q96RF0 SFTPB-207ENST00000519937 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNX18Q96RF0 EXOSC2-211ENST00000546165 1956 ntTSL 2 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SNX18Q96RF0 TSNAX-201ENST00000366639 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNX18Q96RF0 AL353795.3-201ENST00000624351 5702 ntBASIC8.64□□□□□ -1.03
SNX18Q96RF0 PAN2-201ENST00000257931 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNX18Q96RF0 AL355103.1-201ENST00000557246 2226 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SNX18Q96RF0 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC8.63□□□□□ -1.03
SNX18Q96RF0 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC8.63□□□□□ -1.03
SNX18Q96RF0 RCAN1-203ENST00000381135 2526 ntTSL 2 BASIC8.63□□□□□ -1.03
SNX18Q96RF0 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SNX18Q96RF0 AC138904.1-201ENST00000501520 2481 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SNX18Q96RF0 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
SNX18Q96RF0 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SNX18Q96RF0 AC105342.1-201ENST00000378334 6848 ntBASIC8.63□□□□□ -1.03
SNX18Q96RF0 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SNX18Q96RF0 ATP7B-215ENST00000634844 4398 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
SNX18Q96RF0 PNMA8A-202ENST00000438932 3335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
SNX18Q96RF0 NCALD-225ENST00000522951 1315 ntTSL 5 BASIC8.63□□□□□ -1.03
SNX18Q96RF0 SYCP3-201ENST00000266743 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SNX18Q96RF0 IGLC2-201ENST00000390323 462 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
SNX18Q96RF0 IGLC3-201ENST00000390325 462 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
SNX18Q96RF0 TRBV6-4-201ENST00000390360 365 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
SNX18Q96RF0 ATP5G1-202ENST00000393366 614 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SNX18Q96RF0 MED18-202ENST00000398997 1106 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
SNX18Q96RF0 SNRPE-202ENST00000414487 942 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SNX18Q96RF0 LINC02028-201ENST00000420947 528 ntTSL 3 BASIC8.63□□□□□ -1.03
SNX18Q96RF0 AL031729.1-201ENST00000433132 192 ntBASIC8.63□□□□□ -1.03
SNX18Q96RF0 MIR4435-2HG-212ENST00000444301 666 ntTSL 3 BASIC8.63□□□□□ -1.03
SNX18Q96RF0 MRPS16P2-201ENST00000445106 408 ntBASIC8.63□□□□□ -1.03
SNX18Q96RF0 BX322234.2-201ENST00000457833 654 ntTSL 3 BASIC8.63□□□□□ -1.03
SNX18Q96RF0 ST13P15-201ENST00000460666 1107 ntBASIC8.63□□□□□ -1.03
SNX18Q96RF0 RN7SL762P-201ENST00000469864 289 ntBASIC8.63□□□□□ -1.03
SNX18Q96RF0 AL033384.2-201ENST00000474641 456 ntTSL 3 BASIC8.63□□□□□ -1.03
SNX18Q96RF0 AC011447.1-201ENST00000497576 441 ntBASIC8.63□□□□□ -1.03
SNX18Q96RF0 AL390726.2-201ENST00000504791 343 ntBASIC8.63□□□□□ -1.03
SNX18Q96RF0 AC090519.1-201ENST00000508195 1002 ntBASIC8.63□□□□□ -1.03
SNX18Q96RF0 AC109466.1-206ENST00000522686 774 ntTSL 5 BASIC8.63□□□□□ -1.03
SNX18Q96RF0 FANCD2OS-206ENST00000524279 1014 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SNX18Q96RF0 AC099511.1-202ENST00000563923 491 ntTSL 3 BASIC8.63□□□□□ -1.03
SNX18Q96RF0 ARL17A-204ENST00000570550 491 ntAPPRIS ALT2 TSL 3 BASIC8.63□□□□□ -1.03
SNX18Q96RF0 ARL17B-204ENST00000571246 491 ntTSL 3 BASIC8.63□□□□□ -1.03
SNX18Q96RF0 RN7SL712P-201ENST00000579354 308 ntBASIC8.63□□□□□ -1.03
SNX18Q96RF0 AC005339.1-201ENST00000598070 392 ntTSL 3 BASIC8.63□□□□□ -1.03
SNX18Q96RF0 AP001995.2-201ENST00000602773 897 ntBASIC8.63□□□□□ -1.03
SNX18Q96RF0 AL596092.1-201ENST00000605701 304 ntBASIC8.63□□□□□ -1.03
SNX18Q96RF0 TP53TG1_1.1-201ENST00000612852 152 ntBASIC8.63□□□□□ -1.03
SNX18Q96RF0 AL138689.1-201ENST00000614612 668 ntBASIC8.63□□□□□ -1.03
SNX18Q96RF0 GPC5-204ENST00000618596 960 ntTSL 5 BASIC8.63□□□□□ -1.03
SNX18Q96RF0 AL031710.2-201ENST00000621884 722 ntBASIC8.63□□□□□ -1.03
SNX18Q96RF0 PRAMEF17-201ENST00000376098 1578 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SNX18Q96RF0 MPI-213ENST00000566377 2809 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms