Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 NPIPA2-202ENST00000530328 954 ntTSL 5 BASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 NPIPA3-202ENST00000531598 1155 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 BDNF-AS-209ENST00000532965 572 ntTSL 4 BASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 NPIPA5-202ENST00000534094 954 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 AC122108.1-201ENST00000558419 424 ntTSL 5 BASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 RPIAP1-201ENST00000587900 742 ntBASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 AC136469.1-201ENST00000595706 511 ntTSL 5 BASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 AC015849.4-201ENST00000603678 421 ntTSL 5 BASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 ELOCP33-201ENST00000603716 632 ntBASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 SDCBP2-AS1-202ENST00000607947 808 ntTSL 3 BASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 AC018648.1-201ENST00000608314 668 ntBASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 AP001767.4-201ENST00000624584 452 ntBASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 AL603840.1-202ENST00000634769 583 ntTSL 5 BASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 TEX51-209ENST00000636457 811 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 FAM166B-207ENST00000639789 651 ntTSL 2 BASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 TCF4-245ENST00000570177 1872 ntTSL 2 BASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 ATP7B-205ENST00000418097 4340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 LPA-202ENST00000447678 1839 ntTSL 5 BASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 GALNT8-201ENST00000252318 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 BPNT1-203ENST00000414869 2357 ntTSL 2 BASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 GRSF1-203ENST00000502323 1794 ntTSL 5 BASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 XCR1-201ENST00000309285 5281 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
NPIPA3F8WFD2 YPEL4-203ENST00000524669 4000 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.03
NPIPA3F8WFD2 CACNB2-202ENST00000324631 3446 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.03
NPIPA3F8WFD2 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
NPIPA3F8WFD2 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
NPIPA3F8WFD2 ZSWIM1-202ENST00000372523 2769 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.03
NPIPA3F8WFD2 TXLNG-201ENST00000380122 4401 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
NPIPA3F8WFD2 TNIK-211ENST00000475336 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
NPIPA3F8WFD2 ZNF300-201ENST00000274599 3268 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
NPIPA3F8WFD2 VPS11-207ENST00000620429 2739 ntTSL 5 BASIC8.65□□□□□ -1.03
NPIPA3F8WFD2 TRIM51-202ENST00000449290 1629 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
NPIPA3F8WFD2 AL132780.5-201ENST00000623843 1625 ntBASIC8.65□□□□□ -1.03
NPIPA3F8WFD2 MOGAT2-203ENST00000526712 3204 ntTSL 2 BASIC8.65□□□□□ -1.03
NPIPA3F8WFD2 AC005996.1-201ENST00000478788 1586 ntBASIC8.65□□□□□ -1.03
NPIPA3F8WFD2 SPIN4-201ENST00000374884 4117 ntAPPRIS P1 BASIC8.65□□□□□ -1.03
NPIPA3F8WFD2 ARHGEF9-225ENST00000636276 4097 ntTSL 5 BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 LINC01734-201ENST00000412672 1518 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 TRIO-224ENST00000620511 1547 ntTSL 2 BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 ITGBL1-201ENST00000376162 2007 ntTSL 2 BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 PSEN1-204ENST00000394164 3046 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 NBPF4-201ENST00000415641 2485 ntAPPRIS P2 TSL 2 BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 NBPF6-202ENST00000495380 2494 ntAPPRIS P2 TSL 5 BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 AC124798.1-201ENST00000568280 2883 ntBASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 ARL11-201ENST00000282026 3760 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 AP001107.1-201ENST00000501708 2792 ntTSL 2 BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 HNRNPKP1-201ENST00000510896 1379 ntBASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 AC013652.1-201ENST00000560197 1378 ntTSL 5 BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 FAM98B-203ENST00000491535 3111 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 DCLRE1C-201ENST00000357717 2228 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 A4GNT-201ENST00000236709 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 ZNF160-201ENST00000355147 1304 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 RARRES3-201ENST00000255688 749 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 FCHO2-201ENST00000287761 1287 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 MAP3K7CL-205ENST00000399926 749 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 AL031229.1-201ENST00000404273 224 ntBASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 AC009226.1-203ENST00000418850 741 ntTSL 5 BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 AP000233.2-202ENST00000418942 684 ntTSL 5 BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 PMP22-204ENST00000426385 571 ntTSL 2 BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 AL445426.1-201ENST00000427290 547 ntTSL 3 BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 MTPN-202ENST00000435723 879 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 DEFA10P-201ENST00000455014 288 ntBASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 RN7SL50P-201ENST00000461146 298 ntBASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 AC010973.1-201ENST00000479085 511 ntTSL 4 BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 COX17-206ENST00000497116 660 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 BAALC-AS1-202ENST00000500902 993 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 LINC02213-201ENST00000504650 518 ntTSL 3 BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 STMN2-202ENST00000518111 799 ntTSL 3 BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 OR4K4P-201ENST00000556991 684 ntBASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 AC087481.1-201ENST00000561684 965 ntBASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 EARS2-207ENST00000563459 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 AC027682.4-202ENST00000565929 515 ntBASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 AC009108.2-201ENST00000566485 269 ntTSL 5 BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 MIR4269-201ENST00000578705 84 ntBASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 AC106037.1-201ENST00000584148 336 ntTSL 5 BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 AL355989.2-201ENST00000603304 512 ntBASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 AC004678.2-201ENST00000623695 1002 ntBASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 CU633904.1-204ENST00000624907 777 ntTSL 3 BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 AP003500.1-201ENST00000626400 527 ntTSL 4 BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 FAAHP1-207ENST00000635606 398 ntTSL 3 BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 DMD-212ENST00000378723 4645 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 AASS-202ENST00000393376 3233 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 GABRA1-203ENST00000428797 4285 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 MSL3-202ENST00000337339 3446 ntTSL 2 BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 ARNTL2-202ENST00000266503 2291 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 AC026358.1-201ENST00000539391 2256 ntTSL 3 BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 PNLIPRP1-201ENST00000358834 1497 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 ALDH1A2-217ENST00000559517 1468 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
NPIPA3F8WFD2 TCTN3-203ENST00000371217 2514 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 RMND1-201ENST00000336451 1413 ntTSL 2 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 CCDC33-203ENST00000398814 2787 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
NPIPA3F8WFD2 ZNF766-206ENST00000599581 2065 ntTSL 2 BASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 490.8 ms