Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL031667.2-201ENST00000423903 323 ntBASIC8.69□□□□□ -1.02
SNX18Q96RF0 LINC00864-201ENST00000429129 746 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 OGFRP1-203ENST00000446578 551 ntTSL 4 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 AC073336.1-201ENST00000448767 664 ntTSL 3 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 AF003529.1-201ENST00000455649 644 ntBASIC8.69□□□□□ -1.02
SNX18Q96RF0 AC022294.1-201ENST00000460993 865 ntTSL 3 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 OR7E100P-201ENST00000489105 1015 ntBASIC8.69□□□□□ -1.02
SNX18Q96RF0 RACK1-233ENST00000514455 791 ntTSL 2 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 RNA5SP40-201ENST00000517147 110 ntBASIC8.69□□□□□ -1.02
SNX18Q96RF0 AC084116.1-201ENST00000521428 489 ntTSL 3 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 AP001830.2-201ENST00000529278 494 ntTSL 2 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 TMEM126A-206ENST00000532180 643 ntTSL 3 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 AP001360.1-201ENST00000534055 518 ntTSL 2 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 COA4-202ENST00000537289 582 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 AP002761.2-201ENST00000541254 618 ntTSL 3 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 AL392023.1-201ENST00000555655 531 ntTSL 3 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 AC138627.1-208ENST00000568137 966 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 MIR4663-201ENST00000582039 76 ntBASIC8.69□□□□□ -1.02
SNX18Q96RF0 BRCA1-227ENST00000591849 563 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 NDUFA6-AS1-208ENST00000600968 662 ntTSL 5 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 AC013400.1-201ENST00000607190 545 ntBASIC8.69□□□□□ -1.02
SNX18Q96RF0 AL137798.1-201ENST00000607700 339 ntBASIC8.69□□□□□ -1.02
SNX18Q96RF0 GPX2-205ENST00000612794 1084 ntAPPRIS ALT1 TSL 5 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 HIST1H4D-201ENST00000614247 312 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 UBXN8-207ENST00000615729 702 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 AC044839.1-208ENST00000634902 917 ntTSL 5 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 LINC01739-204ENST00000641712 1005 ntBASIC8.69□□□□□ -1.02
SNX18Q96RF0 HEATR6-203ENST00000585976 3288 ntTSL 5 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 HEATR6-212ENST00000613428 3287 ntTSL 5 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 H2AFY-215ENST00000510038 1314 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 PDPN-212ENST00000621990 2738 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 CHEK2-207ENST00000403642 1359 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 SLFN12L-202ENST00000361112 2752 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 SMIM12-204ENST00000446026 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 LINC00607-204ENST00000423530 2104 ntTSL 2 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 STRADA-230ENST00000638702 2140 ntTSL 5 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 MDH1-215ENST00000539945 1443 ntTSL 2 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 PRICKLE1-213ENST00000639589 5761 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 NCAM1-222ENST00000615285 6045 ntTSL 5 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 CCDC113-201ENST00000219299 5272 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 FCRLA-205ENST00000350710 1639 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
SNX18Q96RF0 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC8.69□□□□□ -1.02
SNX18Q96RF0 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC8.68□□□□□ -1.02
SNX18Q96RF0 TXLNGY-203ENST00000445715 1915 ntBASIC8.68□□□□□ -1.02
SNX18Q96RF0 WDR76-201ENST00000263795 3978 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
SNX18Q96RF0 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
SNX18Q96RF0 AC000036.1-201ENST00000449652 2030 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SNX18Q96RF0 OR9I1-202ENST00000641439 3184 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
SNX18Q96RF0 KIAA0100-202ENST00000528896 7407 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
SNX18Q96RF0 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SNX18Q96RF0 EYA1-204ENST00000388741 3404 ntTSL 5 BASIC8.68□□□□□ -1.02
SNX18Q96RF0 PNPT1P1-201ENST00000450418 2315 ntBASIC8.68□□□□□ -1.02
SNX18Q96RF0 EZH1-205ENST00000585893 2394 ntTSL 2 BASIC8.68□□□□□ -1.02
SNX18Q96RF0 EZH1-217ENST00000590078 2392 ntTSL 2 BASIC8.68□□□□□ -1.02
SNX18Q96RF0 S100A7A-201ENST00000329256 491 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SNX18Q96RF0 RAET1E-201ENST00000357183 958 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
SNX18Q96RF0 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SNX18Q96RF0 RN7SKP249-201ENST00000365490 355 ntBASIC8.68□□□□□ -1.02
SNX18Q96RF0 WFDC3-203ENST00000372630 597 ntTSL 3 BASIC8.68□□□□□ -1.02
SNX18Q96RF0 PRR13-201ENST00000379786 927 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
SNX18Q96RF0 NXNP1-201ENST00000397383 1051 ntBASIC8.68□□□□□ -1.02
SNX18Q96RF0 SLC25A6P6-201ENST00000404247 778 ntBASIC8.68□□□□□ -1.02
SNX18Q96RF0 AL731533.1-201ENST00000439575 608 ntTSL 2 BASIC8.68□□□□□ -1.02
SNX18Q96RF0 LINC02561-201ENST00000449457 692 ntTSL 3 BASIC8.68□□□□□ -1.02
SNX18Q96RF0 LINC01231-201ENST00000452746 886 ntTSL 3 BASIC8.68□□□□□ -1.02
SNX18Q96RF0 DMKN-219ENST00000461300 567 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
SNX18Q96RF0 RN7SL310P-201ENST00000465317 281 ntBASIC8.68□□□□□ -1.02
SNX18Q96RF0 DMKN-239ENST00000474928 577 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
SNX18Q96RF0 RPSAP55-201ENST00000477347 876 ntBASIC8.68□□□□□ -1.02
SNX18Q96RF0 DMKN-253ENST00000488892 414 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
SNX18Q96RF0 C5orf66-203ENST00000513931 474 ntTSL 3 BASIC8.68□□□□□ -1.02
SNX18Q96RF0 SNORA68.4-201ENST00000516649 129 ntBASIC8.68□□□□□ -1.02
SNX18Q96RF0 AC091980.1-201ENST00000524262 288 ntBASIC8.68□□□□□ -1.02
SNX18Q96RF0 AC009652.1-201ENST00000528326 648 ntTSL 5 BASIC8.68□□□□□ -1.02
SNX18Q96RF0 AC243972.2-201ENST00000541653 991 ntBASIC8.68□□□□□ -1.02
SNX18Q96RF0 AC025161.1-201ENST00000552481 591 ntBASIC8.68□□□□□ -1.02
SNX18Q96RF0 HMGN2P40-201ENST00000566875 391 ntBASIC8.68□□□□□ -1.02
SNX18Q96RF0 MIR4274-201ENST00000579577 91 ntBASIC8.68□□□□□ -1.02
SNX18Q96RF0 AC008753.2-201ENST00000597420 387 ntBASIC8.68□□□□□ -1.02
SNX18Q96RF0 NAPGP1-201ENST00000603818 719 ntBASIC8.68□□□□□ -1.02
SNX18Q96RF0 EDRF1-AS1-207ENST00000610534 706 ntTSL 5 BASIC8.68□□□□□ -1.02
SNX18Q96RF0 CLIC1-210ENST00000616760 1098 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
SNX18Q96RF0 AC137936.1-201ENST00000636316 845 ntTSL 5 BASIC8.68□□□□□ -1.02
SNX18Q96RF0 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SNX18Q96RF0 PTPRVP-201ENST00000482597 3999 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SNX18Q96RF0 GSDMC-201ENST00000276708 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SNX18Q96RF0 KCNK2-202ENST00000391895 1410 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SNX18Q96RF0 SRI-204ENST00000431660 1418 ntTSL 2 BASIC8.68□□□□□ -1.02
SNX18Q96RF0 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
SNX18Q96RF0 BTN2A1-204ENST00000469185 1687 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SNX18Q96RF0 DDX10-203ENST00000526794 6707 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SNX18Q96RF0 C15orf32-202ENST00000624458 1749 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SNX18Q96RF0 ASTN1-204ENST00000424564 3685 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SNX18Q96RF0 JAZF1-AS1-202ENST00000444500 3684 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SNX18Q96RF0 MOV10L1-205ENST00000395858 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
SNX18Q96RF0 ACOX1-202ENST00000301608 2215 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SNX18Q96RF0 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms