Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
DNMT3AQ9Y6K1 HLA-L-209ENST00000420110 1011 ntBASIC20.23■□□□□ 0.83
DNMT3AQ9Y6K1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.23■□□□□ 0.83
DNMT3AQ9Y6K1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.23■□□□□ 0.83
DNMT3AQ9Y6K1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.23■□□□□ 0.83
DNMT3AQ9Y6K1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.23■□□□□ 0.83
DNMT3AQ9Y6K1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
DNMT3AQ9Y6K1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
DNMT3AQ9Y6K1 AC026310.3-201ENST00000625186 2373 ntBASIC20.23■□□□□ 0.83
DNMT3AQ9Y6K1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.23■□□□□ 0.83
DNMT3AQ9Y6K1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
DNMT3AQ9Y6K1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.23■□□□□ 0.83
DNMT3AQ9Y6K1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.23■□□□□ 0.83
DNMT3AQ9Y6K1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DNMT3AQ9Y6K1 MKRN4P-201ENST00000444706 1521 ntBASIC20.22■□□□□ 0.83
DNMT3AQ9Y6K1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DNMT3AQ9Y6K1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DNMT3AQ9Y6K1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DNMT3AQ9Y6K1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DNMT3AQ9Y6K1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
DNMT3AQ9Y6K1 MCRIP2P1-201ENST00000394346 511 ntBASIC20.22■□□□□ 0.83
DNMT3AQ9Y6K1 GUSBP6-202ENST00000438529 1198 ntBASIC20.22■□□□□ 0.83
DNMT3AQ9Y6K1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.22■□□□□ 0.83
DNMT3AQ9Y6K1 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.22■□□□□ 0.83
DNMT3AQ9Y6K1 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.22■□□□□ 0.83
DNMT3AQ9Y6K1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
DNMT3AQ9Y6K1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
DNMT3AQ9Y6K1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
DNMT3AQ9Y6K1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DNMT3AQ9Y6K1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
DNMT3AQ9Y6K1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.22■□□□□ 0.83
DNMT3AQ9Y6K1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
DNMT3AQ9Y6K1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
DNMT3AQ9Y6K1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DNMT3AQ9Y6K1 AC093787.1-201ENST00000450396 207 ntBASIC20.21■□□□□ 0.83
DNMT3AQ9Y6K1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.21■□□□□ 0.83
DNMT3AQ9Y6K1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
DNMT3AQ9Y6K1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.21■□□□□ 0.83
DNMT3AQ9Y6K1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.21■□□□□ 0.83
DNMT3AQ9Y6K1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.21■□□□□ 0.83
DNMT3AQ9Y6K1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.21■□□□□ 0.83
DNMT3AQ9Y6K1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DNMT3AQ9Y6K1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.21■□□□□ 0.83
DNMT3AQ9Y6K1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DNMT3AQ9Y6K1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DNMT3AQ9Y6K1 AC121338.2-201ENST00000622535 1744 ntBASIC20.21■□□□□ 0.83
DNMT3AQ9Y6K1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.21■□□□□ 0.83
DNMT3AQ9Y6K1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.21■□□□□ 0.83
DNMT3AQ9Y6K1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DNMT3AQ9Y6K1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.21■□□□□ 0.83
DNMT3AQ9Y6K1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DNMT3AQ9Y6K1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.21■□□□□ 0.83
DNMT3AQ9Y6K1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.21■□□□□ 0.83
DNMT3AQ9Y6K1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DNMT3AQ9Y6K1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DNMT3AQ9Y6K1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DNMT3AQ9Y6K1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
DNMT3AQ9Y6K1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.2■□□□□ 0.82
DNMT3AQ9Y6K1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
DNMT3AQ9Y6K1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
DNMT3AQ9Y6K1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DNMT3AQ9Y6K1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.2■□□□□ 0.82
DNMT3AQ9Y6K1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DNMT3AQ9Y6K1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DNMT3AQ9Y6K1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.2■□□□□ 0.82
DNMT3AQ9Y6K1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.19■□□□□ 0.82
DNMT3AQ9Y6K1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
DNMT3AQ9Y6K1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DNMT3AQ9Y6K1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DNMT3AQ9Y6K1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DNMT3AQ9Y6K1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DNMT3AQ9Y6K1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DNMT3AQ9Y6K1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.19■□□□□ 0.82
DNMT3AQ9Y6K1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.19■□□□□ 0.82
DNMT3AQ9Y6K1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DNMT3AQ9Y6K1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DNMT3AQ9Y6K1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
DNMT3AQ9Y6K1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
DNMT3AQ9Y6K1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
DNMT3AQ9Y6K1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
DNMT3AQ9Y6K1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DNMT3AQ9Y6K1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DNMT3AQ9Y6K1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DNMT3AQ9Y6K1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
DNMT3AQ9Y6K1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
DNMT3AQ9Y6K1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DNMT3AQ9Y6K1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DNMT3AQ9Y6K1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
DNMT3AQ9Y6K1 AC142086.2-201ENST00000569753 217 ntBASIC20.18■□□□□ 0.82
DNMT3AQ9Y6K1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.18■□□□□ 0.82
DNMT3AQ9Y6K1 CYP2T3P-201ENST00000601990 817 ntBASIC20.18■□□□□ 0.82
DNMT3AQ9Y6K1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
DNMT3AQ9Y6K1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.18■□□□□ 0.82
DNMT3AQ9Y6K1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DNMT3AQ9Y6K1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DNMT3AQ9Y6K1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
DNMT3AQ9Y6K1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DNMT3AQ9Y6K1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
DNMT3AQ9Y6K1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.17■□□□□ 0.82
DNMT3AQ9Y6K1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms