Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AP4B1Q9Y6B7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP4B1Q9Y6B7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
AP4B1Q9Y6B7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AP4B1Q9Y6B7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.72■□□□□ 0.75
AP4B1Q9Y6B7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP4B1Q9Y6B7 AC010141.3-201ENST00000456659 717 ntBASIC19.72■□□□□ 0.75
AP4B1Q9Y6B7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.72■□□□□ 0.75
AP4B1Q9Y6B7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AP4B1Q9Y6B7 SMG8-203ENST00000578922 2178 ntBASIC19.72■□□□□ 0.75
AP4B1Q9Y6B7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.72■□□□□ 0.75
AP4B1Q9Y6B7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP4B1Q9Y6B7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
AP4B1Q9Y6B7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP4B1Q9Y6B7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AP4B1Q9Y6B7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP4B1Q9Y6B7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
AP4B1Q9Y6B7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
AP4B1Q9Y6B7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP4B1Q9Y6B7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP4B1Q9Y6B7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP4B1Q9Y6B7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP4B1Q9Y6B7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
AP4B1Q9Y6B7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
AP4B1Q9Y6B7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
AP4B1Q9Y6B7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP4B1Q9Y6B7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.71■□□□□ 0.75
AP4B1Q9Y6B7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.71■□□□□ 0.75
AP4B1Q9Y6B7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
AP4B1Q9Y6B7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP4B1Q9Y6B7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.71■□□□□ 0.75
AP4B1Q9Y6B7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP4B1Q9Y6B7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP4B1Q9Y6B7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.74
AP4B1Q9Y6B7 AC018445.3-201ENST00000624177 1945 ntBASIC19.7■□□□□ 0.74
AP4B1Q9Y6B7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4B1Q9Y6B7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.7■□□□□ 0.74
AP4B1Q9Y6B7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4B1Q9Y6B7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4B1Q9Y6B7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
AP4B1Q9Y6B7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4B1Q9Y6B7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4B1Q9Y6B7 MIR572-201ENST00000384983 95 ntBASIC19.7■□□□□ 0.74
AP4B1Q9Y6B7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
AP4B1Q9Y6B7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.7■□□□□ 0.74
AP4B1Q9Y6B7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.7■□□□□ 0.74
AP4B1Q9Y6B7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4B1Q9Y6B7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.7■□□□□ 0.74
AP4B1Q9Y6B7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
AP4B1Q9Y6B7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4B1Q9Y6B7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
AP4B1Q9Y6B7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4B1Q9Y6B7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4B1Q9Y6B7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.7■□□□□ 0.74
AP4B1Q9Y6B7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4B1Q9Y6B7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4B1Q9Y6B7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
AP4B1Q9Y6B7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AP4B1Q9Y6B7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
AP4B1Q9Y6B7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4B1Q9Y6B7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.69■□□□□ 0.74
AP4B1Q9Y6B7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.69■□□□□ 0.74
AP4B1Q9Y6B7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
AP4B1Q9Y6B7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
AP4B1Q9Y6B7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4B1Q9Y6B7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4B1Q9Y6B7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.69■□□□□ 0.74
AP4B1Q9Y6B7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.69■□□□□ 0.74
AP4B1Q9Y6B7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
AP4B1Q9Y6B7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.69■□□□□ 0.74
AP4B1Q9Y6B7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4B1Q9Y6B7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4B1Q9Y6B7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4B1Q9Y6B7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AP4B1Q9Y6B7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4B1Q9Y6B7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
AP4B1Q9Y6B7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
AP4B1Q9Y6B7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP4B1Q9Y6B7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP4B1Q9Y6B7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP4B1Q9Y6B7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP4B1Q9Y6B7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.68■□□□□ 0.74
AP4B1Q9Y6B7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.68■□□□□ 0.74
AP4B1Q9Y6B7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP4B1Q9Y6B7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
AP4B1Q9Y6B7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.68■□□□□ 0.74
AP4B1Q9Y6B7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.68■□□□□ 0.74
AP4B1Q9Y6B7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.68■□□□□ 0.74
AP4B1Q9Y6B7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP4B1Q9Y6B7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP4B1Q9Y6B7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP4B1Q9Y6B7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP4B1Q9Y6B7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
AP4B1Q9Y6B7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP4B1Q9Y6B7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
AP4B1Q9Y6B7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP4B1Q9Y6B7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.67■□□□□ 0.74
AP4B1Q9Y6B7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP4B1Q9Y6B7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP4B1Q9Y6B7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms