Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX11Q9Y5W9 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX11Q9Y5W9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX11Q9Y5W9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.47■□□□□ 0.87
SNX11Q9Y5W9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX11Q9Y5W9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.47■□□□□ 0.87
SNX11Q9Y5W9 MCRIP2P1-201ENST00000394346 511 ntBASIC20.47■□□□□ 0.87
SNX11Q9Y5W9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.47■□□□□ 0.87
SNX11Q9Y5W9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.47■□□□□ 0.87
SNX11Q9Y5W9 AL359736.2-201ENST00000621992 437 ntBASIC20.47■□□□□ 0.87
SNX11Q9Y5W9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.47■□□□□ 0.87
SNX11Q9Y5W9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.47■□□□□ 0.87
SNX11Q9Y5W9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX11Q9Y5W9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX11Q9Y5W9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SNX11Q9Y5W9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX11Q9Y5W9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SNX11Q9Y5W9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SNX11Q9Y5W9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.46■□□□□ 0.87
SNX11Q9Y5W9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNX11Q9Y5W9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.46■□□□□ 0.87
SNX11Q9Y5W9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SNX11Q9Y5W9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SNX11Q9Y5W9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SNX11Q9Y5W9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.46■□□□□ 0.87
SNX11Q9Y5W9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
SNX11Q9Y5W9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.46■□□□□ 0.87
SNX11Q9Y5W9 AC008550.1-201ENST00000511500 884 ntBASIC20.46■□□□□ 0.87
SNX11Q9Y5W9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.46■□□□□ 0.87
SNX11Q9Y5W9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.46■□□□□ 0.87
SNX11Q9Y5W9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.46■□□□□ 0.87
SNX11Q9Y5W9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SNX11Q9Y5W9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNX11Q9Y5W9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.46■□□□□ 0.87
SNX11Q9Y5W9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
SNX11Q9Y5W9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SNX11Q9Y5W9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX11Q9Y5W9 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.45■□□□□ 0.86
SNX11Q9Y5W9 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SNX11Q9Y5W9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX11Q9Y5W9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX11Q9Y5W9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX11Q9Y5W9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX11Q9Y5W9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.45■□□□□ 0.86
SNX11Q9Y5W9 UBE2SP1-201ENST00000450587 669 ntBASIC20.45■□□□□ 0.86
SNX11Q9Y5W9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.45■□□□□ 0.86
SNX11Q9Y5W9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.45■□□□□ 0.86
SNX11Q9Y5W9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
SNX11Q9Y5W9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNX11Q9Y5W9 AC010542.4-201ENST00000563151 1910 ntBASIC20.45■□□□□ 0.86
SNX11Q9Y5W9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.45■□□□□ 0.86
SNX11Q9Y5W9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SNX11Q9Y5W9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SNX11Q9Y5W9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.44■□□□□ 0.86
SNX11Q9Y5W9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.44■□□□□ 0.86
SNX11Q9Y5W9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SNX11Q9Y5W9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.44■□□□□ 0.86
SNX11Q9Y5W9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.44■□□□□ 0.86
SNX11Q9Y5W9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.44■□□□□ 0.86
SNX11Q9Y5W9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
SNX11Q9Y5W9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.44■□□□□ 0.86
SNX11Q9Y5W9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
SNX11Q9Y5W9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.44■□□□□ 0.86
SNX11Q9Y5W9 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.44■□□□□ 0.86
SNX11Q9Y5W9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNX11Q9Y5W9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SNX11Q9Y5W9 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNX11Q9Y5W9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX11Q9Y5W9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX11Q9Y5W9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNX11Q9Y5W9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SNX11Q9Y5W9 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX11Q9Y5W9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SNX11Q9Y5W9 KRT18P68-201ENST00000392293 1000 ntBASIC20.43■□□□□ 0.86
SNX11Q9Y5W9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SNX11Q9Y5W9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX11Q9Y5W9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX11Q9Y5W9 PNMA6B-201ENST00000538162 1200 ntBASIC20.43■□□□□ 0.86
SNX11Q9Y5W9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.43■□□□□ 0.86
SNX11Q9Y5W9 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.43■□□□□ 0.86
SNX11Q9Y5W9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX11Q9Y5W9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX11Q9Y5W9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.43■□□□□ 0.86
SNX11Q9Y5W9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNX11Q9Y5W9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.43■□□□□ 0.86
SNX11Q9Y5W9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX11Q9Y5W9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
SNX11Q9Y5W9 AC092368.3-202ENST00000574180 1591 ntBASIC20.42■□□□□ 0.86
SNX11Q9Y5W9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.42■□□□□ 0.86
SNX11Q9Y5W9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNX11Q9Y5W9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX11Q9Y5W9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNX11Q9Y5W9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNX11Q9Y5W9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.42■□□□□ 0.86
SNX11Q9Y5W9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.42■□□□□ 0.86
SNX11Q9Y5W9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.42■□□□□ 0.86
SNX11Q9Y5W9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNX11Q9Y5W9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX11Q9Y5W9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNX11Q9Y5W9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms