Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAI2Q9Y5P3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAI2Q9Y5P3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RAI2Q9Y5P3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAI2Q9Y5P3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAI2Q9Y5P3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAI2Q9Y5P3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAI2Q9Y5P3 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.85■□□□□ 0.93
RAI2Q9Y5P3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAI2Q9Y5P3 CDV3P1-201ENST00000471403 739 ntBASIC20.85■□□□□ 0.93
RAI2Q9Y5P3 AC005181.1-201ENST00000604782 1256 ntBASIC20.85■□□□□ 0.93
RAI2Q9Y5P3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.85■□□□□ 0.93
RAI2Q9Y5P3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
RAI2Q9Y5P3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAI2Q9Y5P3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAI2Q9Y5P3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RAI2Q9Y5P3 AC011484.1-201ENST00000377652 1995 ntBASIC20.85■□□□□ 0.93
RAI2Q9Y5P3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAI2Q9Y5P3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.85■□□□□ 0.93
RAI2Q9Y5P3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAI2Q9Y5P3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAI2Q9Y5P3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAI2Q9Y5P3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAI2Q9Y5P3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.84■□□□□ 0.93
RAI2Q9Y5P3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAI2Q9Y5P3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAI2Q9Y5P3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RAI2Q9Y5P3 AC007322.3-201ENST00000426526 701 ntBASIC20.84■□□□□ 0.93
RAI2Q9Y5P3 AC093827.2-201ENST00000512654 315 ntBASIC20.84■□□□□ 0.93
RAI2Q9Y5P3 KRT18P6-201ENST00000555540 1265 ntBASIC20.84■□□□□ 0.93
RAI2Q9Y5P3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAI2Q9Y5P3 AL162412.1-201ENST00000567129 965 ntBASIC20.84■□□□□ 0.93
RAI2Q9Y5P3 AC142086.2-201ENST00000569753 217 ntBASIC20.84■□□□□ 0.93
RAI2Q9Y5P3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.84■□□□□ 0.93
RAI2Q9Y5P3 AC016405.3-201ENST00000607710 860 ntBASIC20.84■□□□□ 0.93
RAI2Q9Y5P3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAI2Q9Y5P3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAI2Q9Y5P3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAI2Q9Y5P3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAI2Q9Y5P3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAI2Q9Y5P3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAI2Q9Y5P3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAI2Q9Y5P3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RAI2Q9Y5P3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAI2Q9Y5P3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RAI2Q9Y5P3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.83■□□□□ 0.93
RAI2Q9Y5P3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAI2Q9Y5P3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAI2Q9Y5P3 CYP2T1P-201ENST00000432607 1285 ntBASIC20.83■□□□□ 0.93
RAI2Q9Y5P3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.83■□□□□ 0.93
RAI2Q9Y5P3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RAI2Q9Y5P3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.83■□□□□ 0.93
RAI2Q9Y5P3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAI2Q9Y5P3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAI2Q9Y5P3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
RAI2Q9Y5P3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
RAI2Q9Y5P3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
RAI2Q9Y5P3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAI2Q9Y5P3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.82■□□□□ 0.92
RAI2Q9Y5P3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.82■□□□□ 0.92
RAI2Q9Y5P3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAI2Q9Y5P3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAI2Q9Y5P3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RAI2Q9Y5P3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAI2Q9Y5P3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAI2Q9Y5P3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.82■□□□□ 0.92
RAI2Q9Y5P3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
RAI2Q9Y5P3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.82■□□□□ 0.92
RAI2Q9Y5P3 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.82■□□□□ 0.92
RAI2Q9Y5P3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.82■□□□□ 0.92
RAI2Q9Y5P3 MIR4651-201ENST00000582622 73 ntBASIC20.82■□□□□ 0.92
RAI2Q9Y5P3 PLK5-205ENST00000642079 1969 ntBASIC20.82■□□□□ 0.92
RAI2Q9Y5P3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RAI2Q9Y5P3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAI2Q9Y5P3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
RAI2Q9Y5P3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAI2Q9Y5P3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
RAI2Q9Y5P3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RAI2Q9Y5P3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RAI2Q9Y5P3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAI2Q9Y5P3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAI2Q9Y5P3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAI2Q9Y5P3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAI2Q9Y5P3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.81■□□□□ 0.92
RAI2Q9Y5P3 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.81■□□□□ 0.92
RAI2Q9Y5P3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.81■□□□□ 0.92
RAI2Q9Y5P3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAI2Q9Y5P3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.81■□□□□ 0.92
RAI2Q9Y5P3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.81■□□□□ 0.92
RAI2Q9Y5P3 FAM21FP-204ENST00000608637 956 ntBASIC20.81■□□□□ 0.92
RAI2Q9Y5P3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAI2Q9Y5P3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.81■□□□□ 0.92
RAI2Q9Y5P3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAI2Q9Y5P3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.81■□□□□ 0.92
RAI2Q9Y5P3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAI2Q9Y5P3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.8■□□□□ 0.92
RAI2Q9Y5P3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAI2Q9Y5P3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAI2Q9Y5P3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
RAI2Q9Y5P3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms